[SciPy-dev] scipy_core Solaris Build: Good and Bad News
Christopher Hanley
chanley at stsci.edu
Fri Oct 21 13:14:29 EDT 2005
> Could you please run scipy.test(10,10) to get a better idea where the
> bus error is occurring?
>>> import scipy
>>> scipy.test(10,10)
scipy/base/tests/test_scimath.py
!! No test file 'test_scimath.py' found for <module
'scipy.base.scimath' from 'scipy/base/scimath.pyc'>
scipy/basic/tests/test_fft.py
!! No test file 'test_fft.py' found for <module 'scipy.basic.fft'
from 'scipy/basic/fft.pyc'>
scipy/tests/test_scipy.py
!! No test file 'test_scipy.py' found for <module 'scipy' from
'scipy/__init__.pyc'>
scipy/test/tests/test_testing.py
!! No test file 'test_testing.py' found for <module
'scipy.test.testing' from 'scipy/test/testing.pyc'>
Found 2 tests for scipy.base.umath
Found 23 tests for scipy.base.function_base
scipy/base/tests/test_machar.py
!! No test file 'test_machar.py' found for <module
'scipy.base.machar' from 'scipy/base/machar.pyc'>
scipy/test/tests/test_test.py
!! No test file 'test_test.py' found for <module 'scipy.test' from
'scipy/test/__init__.pyc'>
scipy/base/tests/test_ma.py
!! No test file 'test_ma.py' found for <module 'scipy.base.ma' from
'scipy/base/ma.pyc'>
scipy/base/tests/test_numerictypes.py
!! No test file 'test_numerictypes.py' found for <module
'scipy.base.numerictypes' from 'scipy/base/numerictypes.pyc'>
scipy/basic/tests/test_basic_lite.py
!! No test file 'test_basic_lite.py' found for <module
'scipy.basic.basic_lite' from 'scipy/basic/basic_lite.pyc'>
scipy/tests/test_core_version.py
!! No test file 'test_core_version.py' found for <module
'scipy.core_version' from 'scipy/core_version.pyc'>
Found 4 tests for scipy.base.getlimits
Found 9 tests for scipy.base.twodim_base
scipy/basic/tests/test_fft_lite.py
!! No test file 'test_fft_lite.py' found for <module
'scipy.basic.fft_lite' from 'scipy/basic/fft_lite.pyc'>
scipy/base/tests/test__compiled_base.py
!! No test file 'test__compiled_base.py' found for <module
'scipy.base._compiled_base' from 'scipy/base/_compiled_base.so'>
scipy/base/tests/test_info_scipy_base.py
!! No test file 'test_info_scipy_base.py' found for <module
'scipy.base.info_scipy_base' from 'scipy/base/info_scipy_base.pyc'>
scipy/base/tests/test_ufunclike.py
!! No test file 'test_ufunclike.py' found for <module
'scipy.base.ufunclike' from 'scipy/base/ufunclike.pyc'>
scipy/test/tests/test_info_scipy_test.py
!! No test file 'test_info_scipy_test.py' found for <module
'scipy.test.info_scipy_test' from 'scipy/test/info_scipy_test.pyc'>
scipy/basic/tests/test_basic.py
!! No test file 'test_basic.py' found for <module 'scipy.basic' from
'scipy/basic/__init__.pyc'>
scipy/basic/tests/test_linalg.py
!! No test file 'test_linalg.py' found for <module
'scipy.basic.linalg' from 'scipy/basic/linalg.pyc'>
scipy/test/tests/test_scipy_test_version.py
!! No test file 'test_scipy_test_version.py' found for <module
'scipy.test.scipy_test_version' from '...py/test/scipy_test_version.pyc'>
scipy/base/tests/test_base.py
!! No test file 'test_base.py' found for <module 'scipy.base' from
'scipy/base/__init__.pyc'>
scipy/base/tests/test_convertcode.py
!! No test file 'test_convertcode.py' found for <module
'scipy.base.convertcode' from 'scipy/base/convertcode.pyc'>
scipy/lib/tests/test_lib.py
!! No test file 'test_lib.py' found for <module 'scipy.lib' from
'scipy/lib/__init__.pyc'>
scipy/base/tests/test_multiarray.py
!! No test file 'test_multiarray.py' found for <module
'scipy.base.multiarray' from 'scipy/base/multiarray.so'>
Found 3 tests for scipy.base.matrix
scipy/base/tests/test_oldnumeric.py
!! No test file 'test_oldnumeric.py' found for <module
'scipy.base.oldnumeric' from 'scipy/base/oldnumeric.pyc'>
Found 44 tests for scipy.base.shape_base
scipy/base/tests/test_numeric.py
!! No test file 'test_numeric.py' found for <module
'scipy.base.numeric' from 'scipy/base/numeric.pyc'>
scipy/lib/tests/test_fftpack_lite.py
!! No test file 'test_fftpack_lite.py' found for <module
'scipy.lib.fftpack_lite' from 'scipy/lib/fftpack_lite.so'>
scipy/lib/tests/test_lapack_lite.py
!! No test file 'test_lapack_lite.py' found for <module
'scipy.lib.lapack_lite' from 'scipy/lib/lapack_lite.so'>
scipy/base/tests/test_polynomial.py
!! No test file 'test_polynomial.py' found for <module
'scipy.base.polynomial' from 'scipy/base/polynomial.pyc'>
Found 42 tests for scipy.base.type_check
scipy/test/tests/test_test.py
!! No test file 'test_test.py' found for <module 'scipy.test' from
'scipy/test/__init__.pyc'>
scipy/base/tests/test_machar.py
!! No test file 'test_machar.py' found for <module
'scipy.base.machar' from 'scipy/base/machar.pyc'>
Found 4 tests for scipy.base.index_tricks
scipy/basic/tests/test_random.py
!! No test file 'test_random.py' found for <module
'scipy.basic.random' from 'scipy/basic/random.pyc'>
Found 0 tests for __main__
check_reduce_complex (scipy.base.umath.test_umath.test_maximum) ... ok
check_reduce_complex (scipy.base.umath.test_umath.test_minimum) ... ok
check_basic (scipy.base.function_base.test_function_base.test_all) ... ok
check_nd (scipy.base.function_base.test_function_base.test_all) ... ok
check_basic (scipy.base.function_base.test_function_base.test_amax) ... ok
check_basic (scipy.base.function_base.test_function_base.test_amin) ... ok
check_basic (scipy.base.function_base.test_function_base.test_angle) ... ok
check_basic (scipy.base.function_base.test_function_base.test_any) ... ok
check_nd (scipy.base.function_base.test_function_base.test_any) ... ok
check_basic (scipy.base.function_base.test_function_base.test_cumprod)
... ok
check_basic (scipy.base.function_base.test_function_base.test_cumsum) ... ok
check_basic (scipy.base.function_base.test_function_base.test_diff) ... ok
check_nd (scipy.base.function_base.test_function_base.test_diff) ... ok
check_basic (scipy.base.function_base.test_function_base.test_extins) ... ok
check_both (scipy.base.function_base.test_function_base.test_extins) ... ok
check_insert (scipy.base.function_base.test_function_base.test_extins)
... ok
check_basic (scipy.base.function_base.test_function_base.test_linspace)
... ok
check_basic (scipy.base.function_base.test_function_base.test_logspace)
... ok
check_basic (scipy.base.function_base.test_function_base.test_prod) ... ok
check_basic (scipy.base.function_base.test_function_base.test_ptp) ... ok
check_basic
(scipy.base.function_base.test_function_base.test_trim_zeros) ... ok
check_leading_skip
(scipy.base.function_base.test_function_base.test_trim_zeros) ... ok
check_trailing_skip
(scipy.base.function_base.test_function_base.test_trim_zeros) ... ok
check_scalar
(scipy.base.function_base.test_function_base.test_vectorize) ... Bus
error (core dumped)
basil> dir
core scipy/
> Also run
>
> print scipy.__core_version__
>
In [1]: import scipy
In [2]: scipy.__core_version__
Out[2]: '0.4.3.1330'
> We still have to figure out why the isnan function is being picked up by
> configure but not by the compilation stage.
I have not found any compile time flags that are specific is isinf or
isnan. I don't believe this is a compiler problem given its occurence
under both Sun and GNU compilers.
I will keep looking.
Chris
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