[SciPy-dev] any FreeBSD user here ?
Ying-Chieh Liao
ijliao at csie.nctu.edu.tw
Tue Jun 8 21:33:16 EDT 2004
I'd like to use SciPy on FreeBSD
I've installed all the dependencies (all from FreeBSD ports collection):
python 2.3.4
py-numeric 23.1
atlas 3.6.0
fftw 2.1.5
djbfft 0.76
But when I build scipy, there are many error messages (attached below)
looks like it cannot find the lapack and blas lib
I think maybe because FreeBSD changes it's name ...
195:-lalapack.1 => /usr/local/lib/libalapack.so.1
197:-lcblas.1 => /usr/local/lib/libcblas.so.1
198:-lf77blas.1 => /usr/local/lib/libf77blas.so.1
200:-lalapack_r.1 => /usr/local/lib/libalapack_r.so.1
202:-lcblas_r.1 => /usr/local/lib/libcblas_r.so.1
203:-lf77blas_r.1 => /usr/local/lib/libf77blas_r.so.1
205:-lptcblas.1 => /usr/local/lib/libptcblas.so.1
206:-lptf77blas.1 => /usr/local/lib/libptf77blas.so.1
How can I let scipy find these libs ?
lapack_opt_info:
atlas_threads_info:
scipy_distutils.system_info.atlas_threads_info
scipy_core/scipy_distutils/system_info.py:595: UserWarning:
*********************************************************************
Could not find lapack library within the ATLAS installation.
*********************************************************************
warnings.warn(message)
FOUND:
libraries = ['ptf77blas', 'ptcblas', 'atlas']
library_dirs = ['/usr/local/lib']
language = c
define_macros = [('ATLAS_WITHOUT_LAPACK', None)]
include_dirs = ['/usr/local/include']
running build_src
building extension "atlas_version" sources
adding 'build/src/atlas_version_0x1f56736.c' to sources.
running build_ext
customize UnixCCompiler
customize UnixCCompiler using build_ext
lapack_info:
NOT AVAILABLE
scipy_core/scipy_distutils/system_info.py:916: UserWarning:
Lapack (http://www.netlib.org/lapack/) libraries not found.
Directories to search for the libraries can be specified in the
scipy_distutils/site.cfg file (section [lapack]) or by setting
the LAPACK environment variable.
warnings.warn(LapackNotFoundError.__doc__)
lapack_src_info:
NOT AVAILABLE
scipy_core/scipy_distutils/system_info.py:919: UserWarning:
Lapack (http://www.netlib.org/lapack/) sources not found.
Directories to search for the sources can be specified in the
scipy_distutils/site.cfg file (section [lapack_src]) or by setting
the LAPACK_SRC environment variable.
warnings.warn(LapackSrcNotFoundError.__doc__)
NOT AVAILABLE
Traceback (most recent call last):
File "setup.py", line 110, in ?
setup_package(ignore_packages)
File "setup.py", line 83, in setup_package
ignore_packages = ignore_packages)
File "scipy_core/scipy_distutils/misc_util.py", line 459, in get_subpackages
config = setup_module.configuration(*args)
File "/tmp/py-scipy/work/SciPy_complete-0.3/Lib/linalg/setup_linalg.py", line 40, in configuration
raise NotFoundError,'no lapack/blas resources found'
scipy_distutils.system_info.NotFoundError: no lapack/blas resources found
--
Pi seconds is a nanocentury.
--- Tom Duff
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