[AstroPy] Storing results into Tables for further SQL queries.

keith keith at sloan-home.co.uk
Mon Sep 9 13:44:16 EDT 2019


Below is the sort of thing I would like to do from python for both GAMA 
and SDSS

It is an example of my use of the SDSS CasJob facility I would like to 
do the same from python and similar accessing GAMA. The way the CasJob 
seems to work is to store to an external database as the query specifies 
into mydb.E_Galaxies where mydb is particular to my login and the other 
tables are available i.e. DR15.Galaxy

Having created mydb.E_Galaxies I would then use the table in future 
joins etc without having to repeat the execution for a large number of 
future queries.

SELECT TOP 5000 ObjID,r,g,i,u,u-r as redness into mydb.E_Galaxies from 
DR15.Galaxy as G
WHERE
G.lnlDev_r > G.lnlExp_r + 0.1
and G.lnlExp_r > -999

and (G.flags & (dbo.fPhotoFlags('BINNED1') + dbo.fPhotoFlags('BINNED2') 
+ dbo.fPhotoFlags('BINNED4'))) > 0

and (G.flags & ( dbo.fPhotoFlags('BLENDED') + 
dbo.fPhotoFlags('NODEBLEND') + dbo.fPhotoFlags('CHILD'))) != 
dbo.fPhotoFlags('BLENDED')

and (G.flags & (dbo.fPhotoFlags('EDGE') + dbo.fPhotoFlags('SATURATED'))) = 0

and G.petroMag_i > 17.5

and (G.petroMag_r > 15.5 or G.petror50_r > 2)
and (G.petroMag_r > 0 and G.g > 0 and G.r > 0 and G.i > 0)
and ( (G.petroMag_r - G.extinction_r) < 19.2
and (G.petroMag_r - G.extinction_r <
(13.1 + (7/3)*(G.g - G.r) + 4 *(G.r - G.i) - 4 * 0.18 ) )
and ( (G.r - G.i - (G.g - G.r)/4 - 0.18) < 0.2 )
and ( (G.r - G.i - (G.g - G.r)/4 - 0.18) > -0.2 ) )
or ( (G.petroMag_r - G.extinction_r < 19.5)
and ( (G.r - G.i - (G.g - G.r)/4 - 0.18) >
(0.45 - 4*(G.g - G.r) ) )
and ( (G.g - G.r) > (1.35 + 0.25 *(G.r - G.i) ) ) )

On 09/09/2019 18:33, Aldcroft, Thomas wrote:
> Hi Keith,
>
> With the astropy Table object you can do table operations like join 
> and merge:
>
> https://docs.astropy.org/en/stable/table/operations.html#table-operations
>
> I'm not entirely clear if your question is about how to get your SQL 
> query results into a Table, or how to do joins with a Table.  Can you 
> provide a bit more detail?
>
> - Tom
>
> On Sun, Sep 8, 2019 at 10:44 AM keith <keith at sloan-home.co.uk 
> <mailto:keith at sloan-home.co.uk>> wrote:
>
>     Apologies for a newby question.
>
>     For my MSc project I need  to run SQL queries against GAMA and SDSS.
>
>     I am using Jupyter on Ubuntu 18.04.
>
>     I can successfully retrieve data by using the astropy python modules.
>
>     I would like to store the results from the more complicated SQL
>     queries
>     into a Table,
>     so that I can perform further joins on both GAMA and SDSS tables.
>
>     How do I go about this?
>
>     Do I have to setup a local database?
>
>     Thanks
>
>     -- 
>     ========== Art & Ceramics ===========
>     https://www.instagram.com/ksloan1952/
>
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-- 
========== Art & Ceramics ===========
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