[SciPy-User] scipy 0.10.0 install error on linux redhat

Jack Bryan dtustudy68 at hotmail.com
Tue Dec 20 18:46:40 EST 2011


Hi, 
I am trying to install scipy   0.10.0. on GNU/linux redhat 2.6.18 X86_64. 
I have installed python 2.4 and numpy 1.6.1.
But, I got error when installing scipy   :
python setup.py build   output: 
blas_opt_info:blas_mkl_info:  libraries mkl,vml,guide not found in /usr/local/lib64  libraries mkl,vml,guide not found in /usr/local/lib  libraries mkl,vml,guide not found in /usr/lib64  libraries mkl,vml,guide not found in /usr/lib  NOT AVAILABLE
atlas_blas_threads_info:Setting PTATLAS=ATLAS  libraries ptf77blas,ptcblas,atlas not found in /usr/local/lib64  libraries ptf77blas,ptcblas,atlas not found in /usr/local/lib  libraries ptf77blas,ptcblas,atlas not found in /usr/lib64/sse2  libraries ptf77blas,ptcblas,atlas not found in /usr/lib64  libraries ptf77blas,ptcblas,atlas not found in /usr/lib/sse2  libraries ptf77blas,ptcblas,atlas not found in /usr/lib  NOT AVAILABLE
atlas_blas_info:  libraries f77blas,cblas,atlas not found in /usr/local/lib64  libraries f77blas,cblas,atlas not found in /usr/local/lib  libraries f77blas,cblas,atlas not found in /usr/lib64/sse2  libraries f77blas,cblas,atlas not found in /usr/lib64  libraries f77blas,cblas,atlas not found in /usr/lib/sse2  libraries f77blas,cblas,atlas not found in /usr/lib  NOT AVAILABLE
UserWarning:    Atlas (http://math-atlas.sourceforge.net/) libraries not found.    Directories to search for the libraries can be specified in the    numpy/distutils/site.cfg file (section [atlas]) or by setting    the ATLAS environment variable.  warnings.warn(AtlasNotFoundError.__doc__)blas_info:  libraries blas not found in /remote/dcnl/Ding/backup_20100716/balsf77/BLAS  libraries blas not found in /usr/local/lib64  libraries blas not found in /usr/local/lib  libraries blas not found in /usr/lib64  libraries blas not found in /usr/lib  NOT AVAILABLE
UserWarning:    Blas (http://www.netlib.org/blas/) libraries not found.    Directories to search for the libraries can be specified in the    numpy/distutils/site.cfg file (section [blas]) or by setting    the BLAS environment variable.  warnings.warn(BlasNotFoundError.__doc__)blas_src_info:  NOT AVAILABLE
/mypath/numpy161/lib64/python2.4/site-packages/numpy/distutils/system_info.py:1426: UserWarning:    Blas (http://www.netlib.org/blas/) sources not found.    Directories to search for the sources can be specified in the    numpy/distutils/site.cfg file (section [blas_src]) or by setting    the BLAS_SRC environment variable.  warnings.warn(BlasSrcNotFoundError.__doc__)Traceback (most recent call last):  File "setup.py", line 196, in ?    setup_package()  File "setup.py", line 187, in setup_package    configuration=configuration )  File "/mypath/numpy161/lib64/python2.4/site-packages/numpy/distutils/core.py", line 152, in setup    config = configuration()  File "setup.py", line 138, in configuration    config.add_subpackage('scipy')  File "/mypath/numpy161/lib64/python2.4/site-packages/numpy/distutils/misc_util.py", line 1002, in add_subpackage    caller_level = 2)  File "/mypath/numpy161/lib64/python2.4/site-packages/numpy/distutils/misc_util.py", line 971, in get_subpackage    caller_level = caller_level + 1)  File "/mypath/numpy161/lib64/python2.4/site-packages/numpy/distutils/misc_util.py", line 908, in _get_configuration_from_setup_py    config = setup_module.configuration(*args)  File "./scipy/setup.py", line 8, in configuration    config.add_subpackage('integrate')  File "/
mypath/numpy161/lib64/python2.4/site-packages/numpy/distutils/misc_util.py", line 1002, in add_subpackage    caller_level = 2)  File "/mypath/numpy161/lib64/python2.4/site-packages/numpy/distutils/misc_util.py", line 971, in get_subpackage    caller_level = caller_level + 1)  File "/mypath/numpy161/lib64/python2.4/site-packages/numpy/distutils/misc_util.py", line 908, in _get_configuration_from_setup_py    config = setup_module.configuration(*args)  File "scipy/integrate/setup.py", line 10, in configuration    blas_opt = get_info('blas_opt',notfound_action=2)  File "/mypath/numpy161/lib64/python2.4/site-packages/numpy/distutils/system_info.py", line 311, in get_info    return cl().get_info(notfound_action)  File "/mypath/numpy161/lib64/python2.4/site-packages/numpy/distutils/system_info.py", line 462, in get_info    raise self.notfounderror(self.notfounderror.__doc__)numpy.distutils.system_info.BlasNotFoundError:    Blas (http://www.netlib.org/blas/) libraries not found.    Directories to search for thhe libraries can be specified in the    numpy/distutils/site.cfg file (section [blas]) or by setting    the BLAS environment variable.
then, i installed BLAS from http://netlib.org/blas/blas.tgz.and update BLAS environment variable BLASPATH. 
But, for installing scipy, i got error:
Traceback (most recent call last):  File "setup.py", line 196, in ?    setup_package()  File "setup.py", line 187, in setup_package    configuration=configuration )  File "/mypath/numpy161/lib64/python2.4/site-packages/numpy/distutils/core.py", line 152, in setup    config = configuration()  File "setup.py", line 138, in configuration    config.add_subpackage('scipy')  File "/mypath/numpy161/lib64/python2.4/site-packages/numpy/distutils/misc_util.py", line 1002, in add_subpackage    caller_level = 2)  File "/mypath/numpy161/lib64/python2.4/site-packages/numpy/distutils/misc_util.py", line 971, in get_subpackage    caller_level = caller_level + 1)  File "/mypath/numpy161/lib64/python2.4/site-packages/numpy/distutils/misc_util.py", line 908, in _get_configuration_from_setup_py    config = setup_module.configuration(*args)  File "./scipy/setup.py", line 8, in configuration    config.add_subpackage('integrate')  File "/mypath/numpy161/lib64/python2.4/site-packages/numpy/distutils/misc_util.py", line 1002, in add_subpackage    caller_level = 2)  File "/mypath/numpy161/lib64/python2.4/site-packages/numpy/distutils/misc_util.py", line 971, in get_subpackage    caller_level = caller_level + 1)  File "/mypath/numpy161/lib64/python2.4/site-packages/numpy/distutils/misc_util.py", line 908, in _get_configuration_from_setup_py    config = setup_module.configuration(*args)  File "scipy/integrate/setup.py", line 10, in configuration    blas_opt = get_info('blas_opt',notfound_action=2)  File "/mypath/numpy161/lib64/python2.4/site-packages/numpy/distutils/system_info.py", line 311, in get_info    return cl().get_info(notfound_action)  File "/mypath/numpy161/lib64/python2.4/site-packages/numpy/distutils/system_info.py", line 462, in get_info    raise self.notfounderror(self.notfounderror.__doc__)numpy.distutils.system_info.BlasNotFoundError:    Blas (http://www.netlib.org/blas/) libraries not found.    Directories to search for the libraries can be specified in the    numpy/distutils/site.cfg file (section [blas]) or by setting    the BLAS environment variable.
Any help is really appreciated. 
thanks

 		 	   		  
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