[SciPy-User] scipy 0.10.0 install error on linux redhat
Jack Bryan
dtustudy68 at hotmail.com
Tue Dec 20 18:46:40 EST 2011
Hi,
I am trying to install scipy 0.10.0. on GNU/linux redhat 2.6.18 X86_64.
I have installed python 2.4 and numpy 1.6.1.
But, I got error when installing scipy :
python setup.py build output:
blas_opt_info:blas_mkl_info: libraries mkl,vml,guide not found in /usr/local/lib64 libraries mkl,vml,guide not found in /usr/local/lib libraries mkl,vml,guide not found in /usr/lib64 libraries mkl,vml,guide not found in /usr/lib NOT AVAILABLE
atlas_blas_threads_info:Setting PTATLAS=ATLAS libraries ptf77blas,ptcblas,atlas not found in /usr/local/lib64 libraries ptf77blas,ptcblas,atlas not found in /usr/local/lib libraries ptf77blas,ptcblas,atlas not found in /usr/lib64/sse2 libraries ptf77blas,ptcblas,atlas not found in /usr/lib64 libraries ptf77blas,ptcblas,atlas not found in /usr/lib/sse2 libraries ptf77blas,ptcblas,atlas not found in /usr/lib NOT AVAILABLE
atlas_blas_info: libraries f77blas,cblas,atlas not found in /usr/local/lib64 libraries f77blas,cblas,atlas not found in /usr/local/lib libraries f77blas,cblas,atlas not found in /usr/lib64/sse2 libraries f77blas,cblas,atlas not found in /usr/lib64 libraries f77blas,cblas,atlas not found in /usr/lib/sse2 libraries f77blas,cblas,atlas not found in /usr/lib NOT AVAILABLE
UserWarning: Atlas (http://math-atlas.sourceforge.net/) libraries not found. Directories to search for the libraries can be specified in the numpy/distutils/site.cfg file (section [atlas]) or by setting the ATLAS environment variable. warnings.warn(AtlasNotFoundError.__doc__)blas_info: libraries blas not found in /remote/dcnl/Ding/backup_20100716/balsf77/BLAS libraries blas not found in /usr/local/lib64 libraries blas not found in /usr/local/lib libraries blas not found in /usr/lib64 libraries blas not found in /usr/lib NOT AVAILABLE
UserWarning: Blas (http://www.netlib.org/blas/) libraries not found. Directories to search for the libraries can be specified in the numpy/distutils/site.cfg file (section [blas]) or by setting the BLAS environment variable. warnings.warn(BlasNotFoundError.__doc__)blas_src_info: NOT AVAILABLE
/mypath/numpy161/lib64/python2.4/site-packages/numpy/distutils/system_info.py:1426: UserWarning: Blas (http://www.netlib.org/blas/) sources not found. Directories to search for the sources can be specified in the numpy/distutils/site.cfg file (section [blas_src]) or by setting the BLAS_SRC environment variable. warnings.warn(BlasSrcNotFoundError.__doc__)Traceback (most recent call last): File "setup.py", line 196, in ? setup_package() File "setup.py", line 187, in setup_package configuration=configuration ) File "/mypath/numpy161/lib64/python2.4/site-packages/numpy/distutils/core.py", line 152, in setup config = configuration() File "setup.py", line 138, in configuration config.add_subpackage('scipy') File "/mypath/numpy161/lib64/python2.4/site-packages/numpy/distutils/misc_util.py", line 1002, in add_subpackage caller_level = 2) File "/mypath/numpy161/lib64/python2.4/site-packages/numpy/distutils/misc_util.py", line 971, in get_subpackage caller_level = caller_level + 1) File "/mypath/numpy161/lib64/python2.4/site-packages/numpy/distutils/misc_util.py", line 908, in _get_configuration_from_setup_py config = setup_module.configuration(*args) File "./scipy/setup.py", line 8, in configuration config.add_subpackage('integrate') File "/
mypath/numpy161/lib64/python2.4/site-packages/numpy/distutils/misc_util.py", line 1002, in add_subpackage caller_level = 2) File "/mypath/numpy161/lib64/python2.4/site-packages/numpy/distutils/misc_util.py", line 971, in get_subpackage caller_level = caller_level + 1) File "/mypath/numpy161/lib64/python2.4/site-packages/numpy/distutils/misc_util.py", line 908, in _get_configuration_from_setup_py config = setup_module.configuration(*args) File "scipy/integrate/setup.py", line 10, in configuration blas_opt = get_info('blas_opt',notfound_action=2) File "/mypath/numpy161/lib64/python2.4/site-packages/numpy/distutils/system_info.py", line 311, in get_info return cl().get_info(notfound_action) File "/mypath/numpy161/lib64/python2.4/site-packages/numpy/distutils/system_info.py", line 462, in get_info raise self.notfounderror(self.notfounderror.__doc__)numpy.distutils.system_info.BlasNotFoundError: Blas (http://www.netlib.org/blas/) libraries not found. Directories to search for thhe libraries can be specified in the numpy/distutils/site.cfg file (section [blas]) or by setting the BLAS environment variable.
then, i installed BLAS from http://netlib.org/blas/blas.tgz.and update BLAS environment variable BLASPATH.
But, for installing scipy, i got error:
Traceback (most recent call last): File "setup.py", line 196, in ? setup_package() File "setup.py", line 187, in setup_package configuration=configuration ) File "/mypath/numpy161/lib64/python2.4/site-packages/numpy/distutils/core.py", line 152, in setup config = configuration() File "setup.py", line 138, in configuration config.add_subpackage('scipy') File "/mypath/numpy161/lib64/python2.4/site-packages/numpy/distutils/misc_util.py", line 1002, in add_subpackage caller_level = 2) File "/mypath/numpy161/lib64/python2.4/site-packages/numpy/distutils/misc_util.py", line 971, in get_subpackage caller_level = caller_level + 1) File "/mypath/numpy161/lib64/python2.4/site-packages/numpy/distutils/misc_util.py", line 908, in _get_configuration_from_setup_py config = setup_module.configuration(*args) File "./scipy/setup.py", line 8, in configuration config.add_subpackage('integrate') File "/mypath/numpy161/lib64/python2.4/site-packages/numpy/distutils/misc_util.py", line 1002, in add_subpackage caller_level = 2) File "/mypath/numpy161/lib64/python2.4/site-packages/numpy/distutils/misc_util.py", line 971, in get_subpackage caller_level = caller_level + 1) File "/mypath/numpy161/lib64/python2.4/site-packages/numpy/distutils/misc_util.py", line 908, in _get_configuration_from_setup_py config = setup_module.configuration(*args) File "scipy/integrate/setup.py", line 10, in configuration blas_opt = get_info('blas_opt',notfound_action=2) File "/mypath/numpy161/lib64/python2.4/site-packages/numpy/distutils/system_info.py", line 311, in get_info return cl().get_info(notfound_action) File "/mypath/numpy161/lib64/python2.4/site-packages/numpy/distutils/system_info.py", line 462, in get_info raise self.notfounderror(self.notfounderror.__doc__)numpy.distutils.system_info.BlasNotFoundError: Blas (http://www.netlib.org/blas/) libraries not found. Directories to search for the libraries can be specified in the numpy/distutils/site.cfg file (section [blas]) or by setting the BLAS environment variable.
Any help is really appreciated.
thanks
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