[SciPy-User] installing pynifti under EPD
Karl Young
karl.young at ucsf.edu
Thu Aug 27 15:45:51 EDT 2009
Sorry if this issue is slightly tangential to the interests of this
group but I couldn't think of any place else to ask (e.g. I don't think
the pynifti guys have a list). I'd like to read some analyze image files
(Mayo clinic medical image file format) into numpy arrays and process
them. This works fine in linux but I'm currently trying to use
Enthought's EPD distribution under OS X (Python 2.5.4 |EPD_Py25 4.3.0|
(r254:67916, May 17 2009, 20:07:12)) and having no luck installing
pynifti to read the analyze files.
I downloaded and tried to install pynifti (pynifti-0.20090303.1) using
the standard distutils mechanism
but when I import nifti I got errors saying some of the symbols in
_clib.so couldn't be found. So I downloaded and installed
nifticlib-1.1.0 but that didn't help, I tried to copy the various
nifticlib libraries into obvious places to no avail and there isn't much
in the way of documentation on this so I was wondering if anyone had the
magic incantation for installing pynifti under EPD on OS X; sorry again
if this is slightly off topic.
-- Karl Young
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