[SciPy-user] scipy compilation succeeds, test fails

[Michele Mazzucco]

Steven,

I did what you said, but unfortunately it still fails (I've re-built
numpy as well):

======================================================================
ERROR: check_simple_todense (scipy.io.tests.test_mmio.test_mmio_coordinate)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/scipy/io/tests/test_mmio.py",
line 151, in check_simple_todense
    b = mmread(fn).todense()
AttributeError: 'numpy.ndarray' object has no attribute 'todense'

======================================================================
FAIL: check_cosine_weighted_infinite
(scipy.integrate.tests.test_quadpack.test_quad)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/scipy/integrate/tests/test_quadpack.py",
line 66, in check_cosine_weighted_infinite
    a/(a**2 + ome**2))
  File "/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/scipy/integrate/tests/test_quadpack.py",
line 9, in assert_quad
    assert abs(value-tabledValue) < err, (value, tabledValue, err)
AssertionError: (0.21667686818858298, 0.21663778162911612,
6.5911747520269308e-10)

======================================================================
FAIL: check_sine_weighted_finite (scipy.integrate.tests.test_quadpack.test_quad)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/scipy/integrate/tests/test_quadpack.py",
line 46, in check_sine_weighted_finite
    (20*sin(ome)-ome*cos(ome)+ome*exp(-20))/(20**2 + ome**2))
  File "/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/scipy/integrate/tests/test_quadpack.py",
line 9, in assert_quad
    assert abs(value-tabledValue) < err, (value, tabledValue, err)
AssertionError: (-2.0010659195591835e-06, -0.0266069863325,
1.4302337979274612e-14)

======================================================================
FAIL: check_sine_weighted_infinite
(scipy.integrate.tests.test_quadpack.test_quad)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/scipy/integrate/tests/test_quadpack.py",
line 56, in check_sine_weighted_infinite
    ome/(a**2 + ome**2))
  File "/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/scipy/integrate/tests/test_quadpack.py",
line 9, in assert_quad
    assert abs(value-tabledValue) < err, (value, tabledValue, err)
AssertionError: (0.12001853532338669, 0.12, 4.3115018629240958e-10)

======================================================================
FAIL: check_dot (scipy.lib.tests.test_blas.test_fblas1_simple)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/scipy/lib/blas/tests/test_blas.py",
line 76, in check_dot
    assert_almost_equal(f([3j,-4,3-4j],[2,3,1]),-9+2j)
  File "/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/testing/utils.py",
line 156, in assert_almost_equal
    assert round(abs(desired - actual),decimal) == 0, msg
AssertionError:
Items are not equal:
 ACTUAL: 7.1376556515469226e-37j
 DESIRED: (-9+2j)

======================================================================
FAIL: check_dot (scipy.linalg.tests.test_blas.test_fblas1_simple)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/scipy/linalg/tests/test_blas.py",
line 75, in check_dot
    assert_almost_equal(f([3j,-4,3-4j],[2,3,1]),-9+2j)
  File "/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/testing/utils.py",
line 156, in assert_almost_equal
    assert round(abs(desired - actual),decimal) == 0, msg
AssertionError:
Items are not equal:
 ACTUAL: 7.2076299948304295e-37j
 DESIRED: (-9+2j)

----------------------------------------------------------------------
Ran 1487 tests in 5.350s

FAILED (failures=5, errors=1)
<unittest.TextTestRunner object at 0x3132410>


Michele


On 4/21/07, Steve Lianoglou <lists.steve at arachnedesign.net> wrote:
> Hi,
>
> > do I need to rebuild numpy as well?, numpy's test is ok.
>
> I'm not really sure, but I would (it's pretty quick, anyway).
>
> Just rebuild from the latest SVN for both numpy and scipy and see
> what happens.
>
> -steve
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