[SciPy-dev] Another segfault
Nils Wagner
nwagner at mecha.uni-stuttgart.de
Thu Mar 2 11:11:24 EST 2006
Ed Schofield wrote:
> Nils Wagner wrote:
>
>> Thank you for your advice. This note should be available on the Wiki as a
>> warning for other users. I have spend more than one day on this - pure
>> waste of time.
>> Anyway the segfault w.r.t. sparse_test.py persists independent from
>> g77/gfortran.
>> Can you reproduce this segfault ?
>>
>>
> I can't. I'm using g77 v3.4.6 with a default distutils config. Does it
> work if you install scipy from scratch this way? It may be a bug,
> rather than a configuration error, but we need to reproduce it to fix it.
>
> -- Ed
>
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>
Hi Ed,
Please find attached my configuration. Are you on a 64 bit machine ?
Reading specs from /usr/lib64/gcc-lib/x86_64-suse-linux/3.3.5/specs
Configured with: ../configure --enable-threads=posix --prefix=/usr
--with-local-prefix=/usr/local --infodir=/usr/share/info
--mandir=/usr/share/man --enable-languages=c,c++,f77,objc,java,ada
--disable-checking --libdir=/usr/lib64 --enable-libgcj
--with-slibdir=/lib64 --with-system-zlib --enable-shared
--enable-__cxa_atexit x86_64-suse-linux
Thread model: posix
gcc version 3.3.5 20050117 (prerelease) (SUSE Linux)
Linux rachel 2.6.11.4-21.11-default #1 Thu Feb 2 20:54:26 UTC 2006
x86_64 x86_64 x86_64 GNU/Linux
Numpy version 0.9.6.2192
Scipy version 0.4.7.1627
dfftw_info:
NOT AVAILABLE
fft_opt_info:
NOT AVAILABLE
mkl_info:
NOT AVAILABLE
djbfft_info:
NOT AVAILABLE
atlas_blas_threads_info:
NOT AVAILABLE
lapack_opt_info:
libraries = ['lapack', 'f77blas', 'cblas', 'atlas']
library_dirs = ['/usr/local/lib/atlas']
define_macros = [('ATLAS_INFO', '"\\"3.7.11\\""')]
language = f77
fftw2_info:
NOT AVAILABLE
fftw3_info:
NOT AVAILABLE
blas_opt_info:
libraries = ['f77blas', 'cblas', 'atlas']
library_dirs = ['/usr/local/lib/atlas']
define_macros = [('ATLAS_INFO', '"\\"3.7.11\\""')]
language = c
atlas_info:
libraries = ['lapack', 'f77blas', 'cblas', 'atlas']
library_dirs = ['/usr/local/lib/atlas']
language = f77
define_macros = [('ATLAS_INFO', '"\\"3.7.11\\""')]
lapack_mkl_info:
NOT AVAILABLE
blas_mkl_info:
NOT AVAILABLE
atlas_blas_info:
libraries = ['f77blas', 'cblas', 'atlas']
library_dirs = ['/usr/local/lib/atlas']
language = c
define_macros = [('ATLAS_INFO', '"\\"3.7.11\\""')]
atlas_threads_info:
NOT AVAILABLE
Just now I have tested it on a 32 bit machine. It works fine there !
Linux amanda 2.6.11.4-21.10-default #1 Tue Nov 29 14:32:49 UTC 2005 i686
athlon i386 GNU/Linux
Numpy version 0.9.6.2191
Scipy version 0.4.7.1625
atlas_threads_info:
NOT AVAILABLE
fft_opt_info:
libraries = ['fftw3']
library_dirs = ['/usr/lib']
define_macros = [('SCIPY_FFTW3_H', None)]
include_dirs = ['/usr/include']
atlas_blas_threads_info:
NOT AVAILABLE
djbfft_info:
NOT AVAILABLE
lapack_opt_info:
libraries = ['lapack', 'f77blas', 'cblas', 'atlas']
library_dirs = ['/usr/local/lib/atlas']
define_macros = [('ATLAS_INFO', '"\\"3.6.0\\""')]
language = f77
fftw3_info:
libraries = ['fftw3']
library_dirs = ['/usr/lib']
define_macros = [('SCIPY_FFTW3_H', None)]
include_dirs = ['/usr/include']
blas_opt_info:
libraries = ['f77blas', 'cblas', 'atlas']
library_dirs = ['/usr/local/lib/atlas']
define_macros = [('ATLAS_INFO', '"\\"3.6.0\\""')]
language = c
atlas_info:
libraries = ['lapack', 'f77blas', 'cblas', 'atlas']
library_dirs = ['/usr/local/lib/atlas']
language = f77
define_macros = [('ATLAS_INFO', '"\\"3.6.0\\""')]
lapack_mkl_info:
NOT AVAILABLE
blas_mkl_info:
NOT AVAILABLE
atlas_blas_info:
libraries = ['f77blas', 'cblas', 'atlas']
library_dirs = ['/usr/local/lib/atlas']
language = c
define_macros = [('ATLAS_INFO', '"\\"3.6.0\\""')]
mkl_info:
NOT AVAILABLE
So I guess its a 64 bit issue ?
Nils
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