what is the best way to show these 12 bit TIFF (saved in 16 bit format) in greyscale?
Stefan van der Walt
stefanv at berkeley.edu
Thu Jul 30 21:06:30 EDT 2015
On 2015-07-30 17:35:00, Alex <alex.liberzon at gmail.com> wrote:
> Could you please help me to use skimage and matplotlib correctly
> to visualise such images:
> https://app.box.com/s/lzpvj29omv5e7eny0hcyxakj032tu8vd
Try something like this:
from skimage import io, exposure
import matplotlib.pyplot as plt
image = io.imread('my_image.tif', plugin='tifffile')
image_eq = exposure.equalize_hist(image)
plt.imshow(image_eq, cmap='gist_heat')
plt.show()
Nice image :)
Stéfan
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