Intensity plot of along the line
Guillaume Gay
guillaume at mitotic-machine.org
Thu Sep 12 14:13:29 EDT 2013
There's a line profile tool in the Tony Yu's ImageViewer..
On 12/09/2013 18:29, Thomas A Caswell wrote:
> scipy.ndimage.interpolation.map_coordinates
> (http://docs.scipy.org/doc/scipy/reference/generated/scipy.ndimage.interpolation.map_coordinates.html)
> + matplotlib will do what you want.
>
> Tom
>
>
> On Thu, Sep 12, 2013 at 11:19 AM, Dan <dkin at walla.co.il
> <mailto:dkin at walla.co.il>> wrote:
>
> Hi,
>
> Is there a way to generate an intensity plot of along the line
> using scikit-image (like Plot Profile option in imageJ) (example:
> http://imagej.1557.x6.nabble.com/file/n3682337/cracks.png).
>
> Thanks.
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> --
> Thomas A Caswell
> PhD Candidate University of Chicago
> Nagel and Gardel labs
> tcaswell at uchicago.edu <mailto:tcaswell at uchicago.edu>
> jfi.uchicago.edu/~tcaswell <http://jfi.uchicago.edu/%7Etcaswell>
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