large PyWavelets update, please test

Ralf Gommers ralf.gommers at gmail.com
Fri Oct 4 06:41:20 EDT 2013


On Fri, Oct 4, 2013 at 12:32 PM, Stuart Mumford <stuart at mumford.me.uk>wrote:

> Hello,
>
> On the topic of wavelet's I am involved in a very small scale effort to
> tidy up this continuous wavelet package, with (if we can contact the
> original author) the eventual aim of making it useful and potentially a
> part of some larger package (scipy?).
>
> https://github.com/nabobalis/kPyWavelet
>

Hi Stuart, that code has a license that's incompatible with both BSD and
GPL licenses so it's pretty much useless. The amount of code there is not
much more than what's already in scipy.signal.wavelets, so improving the
scipy cwt code would probably be a better idea.

Ralf



>
> Stuart
>
>
> On 4 October 2013 09:15, François Boulogne <fboulogne at sciunto.org> wrote:
>
>> Dear skimagers,
>>
>>
>> With Ralf, we initiated a "friendly" fork of pywavelet for a future
>> inclusion in scipy and David joined us in this work. We improved the
>> doc, removed old-fashioned codes and we are trying now to add tests.
>> We started this because I was considering this ticket:
>> https://github.com/scikit-image/scikit-image/issues/602
>> Indeed, I believe wavelets may be useful for scikit-image. Instead of
>> requiring a new dependency, I thought it is much more valuable to
>> integrate the code in scipy and this is now in the workplan for scipy1.0.
>>
>> If some of you used pywavelet before, we would be grateful to you if you
>> can check your code against the fork. It must be fully compatible with
>> pywavelets.
>>
>> Thanks!
>> Cheers.
>> François.
>>
>>
>> -------- Message original --------
>> Sujet:  large PyWavelets update, please test
>> Date :  Tue, 1 Oct 2013 17:56:36 +0200
>> De :    Ralf Gommers <ralf.gommers at gmail.com>
>> Pour :  pywavelets at googlegroups.com
>> Copie à :       François Boulogne <fboulogne at sciunto.org>,
>> david.menendez.hurtado at scilifelab.se
>>
>>
>>
>> Hi all,
>>
>> https://github.com/nigma/pywt/pull/7 contains a large refactoring of
>> PyWavelets, with contributions from Francois Boulogne, David Menendez
>> Hurtado and myself. Main feature is support for Python 3 (single code
>> base). Other changes are:
>>
>> - Numpy style docstrings for all public functions
>> - A unit test suite with reasonable coverage (see
>> https://coveralls.io/r/rgommers/pywt)
>> - PEP8 and Numpy C code standard compliance
>> - Changes to source tree layout, build setup, Numpy interfaces and C and
>> Cython templating to more standard styles.
>>
>> This set of changes is supposed to be fully backwards compatible. They
>> were quite invasive though (~150 commits), so there's a decent chance
>> that some things not covered by the test suite were broken in the
>> process. To catch those now, it would be very helpful if people could
>> test their own code against either use the PR or the master branch of
>> https://github.com/rgommers/pywt.
>>
>> While we've kept full backwards compatibility so far, we've also
>> compiled a list of things that could be improved in the current API:
>> https://github.com/rgommers/pywt/issues/38. Please add suggestions there
>> if you have them.
>>
>> Cheers,
>> Ralf
>>
>>
>>
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