GUI tools and upsizing

[Guillaume Gay]

Ok, sounds good to me too, if nobody objects...


Guillaume

Le 21/02/2012 08:04, Neil Yager a écrit :
> I agree that there are some benefits of both viewers. However, I work
> a lot with 16-bit greyscale, and I like the pan&  zoom of the
> matplotlib-based viewer. Therefore, I've found myself using the
> TIFFFile one more lately. Adding the line profile&  some contrast
> adjustment to this viewer would be great.
>
> Neil
>
> On Feb 20, 11:11 am, Guillaume Gay<guilla... at mitotic-machine.org>
> wrote:
>> Ok, I can give it a try...
>>
>> Some questions then:
>>
>> - skivi is pure Qt, so must I keep it that way (no matplotlib dependency)?
>> - skivi is good for RGB images, but not so much for greyscale... Also
>> data conversion from uint16 to uint8 turns everything black (it set
>> anything>  256 to 0), shall this be corrected?
>> -Christoph Gohlke tifffile.imshow() is somehow closer to what us
>> microscopy guys are expecting (more suitable for those greyscale
>> multipage tiffs), though some features of the fancy viewer such as the
>> contrast settings, are great. Also it is a pure matplotlib
>> implementation and the intensity value reading is already there. So my
>> question is:
>> Are those tools needed by the general image analysis skimage community
>> are more by scientific tiff users? If the latest, my guess is that
>> building on top of matplotlib and Christoph's implementation of imshow
>> is a better tactic (plus it would be more cross platform, as this can be
>> a widget irrespective of the backend).
>>
>> Cheers,
>>
>> Guillaume
>>
>> Le 20/02/2012 08:04, Stéfan van der Walt a écrit :
>>
>>
>>
>>
>>
>>
>>
>>> On Fri, Feb 17, 2012 at 6:53 AM, Guillaume Gay
>>> <guilla... at mitotic-machine.org>    wrote:
>>>> I just happen to code a simple linescan function, if that helps...
>>> Thanks, Guillaume!  If you could integrate this with the fancy Qt
>>> imshow to display the line, that would be wonderful, but otherwise I'm
>>> sure we'll still be able to use this code.
>>> Stéfan
>>
>>
>>   guillaume.vcf
>> <  1KViewDownload

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