[ python-Bugs-1544106 ] test_anydbm segmentation fault

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Tue Sep 5 17:07:17 CEST 2006


Bugs item #1544106, was opened at 2006-08-21 14:02
Message generated for change (Comment added) made by cspence
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Category: Extension Modules
Group: Python 2.5
Status: Open
Resolution: None
Priority: 5
Submitted By: Clay Spence (cspence)
Assigned to: Gregory P. Smith (greg)
Summary: test_anydbm segmentation fault

Initial Comment:
After building 2.5rc1 and bfore installing, make test
failed for me at test_anydbm:

cholla 88% uname -a
Linux cholla.sarnoff.com 2.6.9-34.ELsmp #1 SMP Fri Feb
24 16:54:53 EST 2006 i686 i686 i386 GNU/Linux

cholla 89% ./python
Python 2.5c1 (r25c1:51305, Aug 21 2006, 11:30:37)
[GCC 3.4.5 20051201 (Red Hat 3.4.5-2)] on linux2
Type "help", "copyright", "credits" or "license" for
more information.
>>>

cholla 90% ./python ./Lib/test/test_anydbm.py
Segmentation fault

cholla 91%

I tracked this to Lib/bsddb/__init__.py, line 355, in
_openDBEnv(): e.set_lk_detect(db.DB_LOCK_DEFAULT) See
the attached pdb text output, if it's useful.


----------------------------------------------------------------------

>Comment By: Clay Spence (cspence)
Date: 2006-09-05 11:07

Message:
Logged In: YES 
user_id=685289

This is my fault. I found some old db headers in the include
directory inside my home directory. I assume they were
causing problems, since deleting them seems to have fixed
the problem, at least now the test passes. I apologize for
wasting people's time.


----------------------------------------------------------------------

Comment By: Gregory P. Smith (greg)
Date: 2006-09-03 19:41

Message:
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user_id=413

i was unable to reproduce this problem on either 32-bit or
64-bit CentOS 4.

----------------------------------------------------------------------

Comment By: Gregory P. Smith (greg)
Date: 2006-09-03 19:14

Message:
Logged In: YES 
user_id=413

weird i would not expect this to happen regardless of
berkeleydb version.

can you also do a 'ldd' on the _bsddb.so binary that your
python build produced?  presumably libdb42.so or something
similar should be in the output.

also, when to compile python does it print out a message
saying what version of the include files and libs it thinks
its compiling and linking with?

it looks like you're using rhel4 or centos4; i'll try
compiling 2.5rc1 on that myself when i get a chance.


----------------------------------------------------------------------

Comment By: Neal Norwitz (nnorwitz)
Date: 2006-08-22 09:45

Message:
Logged In: YES 
user_id=33168

Yes, correct.  4.2.52 is the version of the C BSD DB
library.  That's a fairly old version.  I believe the bug is
in there.  If you update to 4.3.x or 4.4.x, I suspect the
problem will go away.

I know very little about bsddb.  The code looks quite
simple.  Assigning Greg as he's probably the only one that
has a chance of knowing.

----------------------------------------------------------------------

Comment By: Clay Spence (cspence)
Date: 2006-08-22 09:26

Message:
Logged In: YES 
user_id=685289

Excuse my ignorance, but I'm not sure how to determine the
version. Poking around gives me:

cholla 92% ./python
Python 2.5c1 (r25c1:51305, Aug 21 2006, 11:30:37)
[GCC 3.4.5 20051201 (Red Hat 3.4.5-2)] on linux2
Type "help", "copyright", "credits" or "license" for more
information.
>>> import bsddb
>>> bsddb.__version__
'4.4.5'
>>> bsddb._bsddb.version()
(4, 2, 52)
>>>

Is it the second?

----------------------------------------------------------------------

Comment By: Neal Norwitz (nnorwitz)
Date: 2006-08-21 19:28

Message:
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I'm guessing this is an old version of berkeley db.  What
version of bdb are you using?

----------------------------------------------------------------------

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