[Numpy-discussion] how to store variable length string in array and get single char by it's position?
kee chen
keekychen.shared at gmail.com
Tue Sep 14 12:25:15 EDT 2010
Dear All,
Suppose I have a list group some kind like DNA sequence:
1 ATGCATGCAATTGGCC
2 ATGCATGCAATTGGCCATCD
3 CATGCAATTGGCCCCCCCCC
......
100000 CATGCAAATTGGCCCCCCCCC
the string length of each item is not sure and may get change/update later,
then how can I store above in a numpy array (include the ID) and easy to get
the single value?
for example
1. ATGCATGCAATTGGCC
I want get the first T then I use something like array[1][1], means
A[T]G...... and if I want to update the 3rd postion I can use array[1][2]
= T to set the AT[G]C... to AT[T]C...?
Thanks for any hints.
Rgs,
KC
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