From z.baratz at gmail.com Sun Apr 2 08:38:37 2023 From: z.baratz at gmail.com (Zvi Baratz) Date: Sun, 2 Apr 2023 15:38:37 +0300 Subject: [Neuroimaging] NiBabel discussion board Message-ID: Hi all, Just wanted to announce NiBabel has enabled GitHub's discussion board (here ). We hope this will provide users and collaborators with an accessible and approachable alternative for sharing work, thoughts, and ideas. You are cordially invited to introduce yourself and/or kick off new discussions. Happy programming, Zvi -------------- next part -------------- An HTML attachment was scrubbed... URL: From garyfallidis at gmail.com Sun Apr 2 21:35:34 2023 From: garyfallidis at gmail.com (Eleftherios Garyfallidis) Date: Sun, 2 Apr 2023 21:35:34 -0400 Subject: [Neuroimaging] Hurry up! Book your spot for the DIPY Workshop in LA! April 24-28 2023!! Message-ID: Dear all, Only a few spots are left. Register now: https://dipy.org/workshops/latest !!! The complete program for the highly anticipated workshop is updated and available in the link above. DIPY is a powerful software library for analyzing and processing diffusion MRI data. It is an open-source project with a large and active community of contributors who are dedicated to advancing the field of medical imaging. The DIPY workshop provides an excellent opportunity for individuals to learn how to use this software effectively. The workshop covers a broad range of topics, from basic concepts to advanced techniques, and provides hands-on experience with the software. By attending the DIPY workshop, you will not only learn how to use this powerful tool, but also gain a deeper understanding of diffusion imaging and machine learning for imaging in general. The workshop is led by expert instructors who have extensive experience in both diffusion imaging and DIPY, so attendees can be confident that they are receiving accurate and up-to-date information. [image: image.png] In summary, the workshop offers: - Hands-on tutorials - Every single day of the 5 days !!! - Guided practice sessions (bring your data - optional) - Personalized certificates of attendance - Effective networking opportunities with one-to-one follow ups - Comprehensive explanation of theoretical foundations with practical examples - Access to latest and established methods with code and interfaces - Pointers to move beyond the current challenges and navigate hard to do analyses - Multiple clinical use cases (AZ, Parkinson?s etc.) See above one of the many highlights of the workshop. Building synthetic b0s (with Synb0) in DIPY 1.7.0! More highlights here . Please allow us to finish this email with a testimonial from one of our last in person workshops: This one is from an expert neuropsychologist: ?In recent years, I've found that many scientific conferences have become plagued with pitfalls such as repetitive content, superficial networking, and a focus on self-promotion rather than genuine knowledge exchange. Attendees often leave these events with a sense of disillusionment, feeling that their time could have been better spent elsewhere. The DIPY workshop, however, was a breath of fresh air in this sea of mediocrity. It was highly interactive, engaging, and hands-on, with a genuine emphasis on learning and collaboration. The organizers went above and beyond to create a welcoming and supportive environment, encouraging researchers of all backgrounds and expertise levels to contribute their ideas and gain valuable insights. By addressing the shortcomings of traditional conferences, the DIPY workshop has rekindled my enthusiasm for scientific events and has set a new standard for what a truly productive and inspiring gathering should be.? We kept our promise! Get your tickets! See you in the workshop! Eleftherios Garyfallidis, PhD Associate Professor Intelligent Systems Engineering Indiana University Luddy Hall 700 N Woodlawn Bloomington, IN 47408 DIPY | FURY -------------- next part -------------- An HTML attachment was scrubbed... URL: -------------- next part -------------- A non-text attachment was scrubbed... Name: image.png Type: image/png Size: 173381 bytes Desc: not available URL: From markiewicz at stanford.edu Wed Apr 5 09:28:51 2023 From: markiewicz at stanford.edu (Christopher Markiewicz) Date: Wed, 5 Apr 2023 13:28:51 +0000 Subject: [Neuroimaging] ANN: NiBabel 5.1.0 Message-ID: Hi all, This is an announcement that I released NiBabel 5.1.0 on Monday. Please cite this release with DOI: https://doi.org/10.5281/zenodo.7795644 The largest change in this release is a breaking change with GIFTI images; previously we were permitting essentially any NumPy type to be encoded in GIFTI data arrays, which violates the standard that only allows uint8, int32 and float32. Now to use non-standard arrays, an explicit dtype needs to be provided during creation, and GiftiImage serialization ( img.to_bytes(), img.to_filename(), nibabel.save(img, ...) ) accepts a `mode` keyword argument that can be "strict" (error on non-standard arrays), "compat" (coerce non-standard arrays to int32 or float32) or "force" (old behavior). This should allow us to avoid unintentionally creating files that cannot be used by other tools in the ecosystem, while permitting tools that want higher precision to decide whether and when to coerce into standard types. Feature-wise, this is a relatively minor release, but with Zvi's help I've added type annotations to significant portions of the user-facing API, which I hope will make working with auto-completing IDEs more helpful and type-checkers more accurate. Note, however, that to get the most out of annotations might require different "best practices" than we've previously used, and to that end I've started a discussion (https://github.com/nipy/nibabel/discussions/1220) where we can collect and discuss idioms. I plan to turn this into documentation as it matures. There is no intentional breakage of existing code due to type annotations, so if you find that something does break, please open an issue so we can fix it. However, code that previously type-checked may now fail because functions that used to have an Any return type now accurately describe the range of their possible return values, and that may not be what you want. This release also includes an update to qform calculation in NIfTI images, bringing our calculations more into line with other tools and reducing the chance of finding a difference between sform and qform when set from the same affine. See https://github.com/nipy/nibabel/issues/1181 for details on what we had been doing and what we changed. Thanks to all contributors for bug reports, pull requests and especially reviews. The full changelog follows. Best, Chris Most work on NiBabel so far has been by Matthew Brett (MB), Chris Markiewicz (CM), Michael Hanke (MH), Marc-Alexandre C?t? (MC), Ben Cipollini (BC), Paul McCarthy (PM), Chris Cheng (CC), Yaroslav Halchenko (YOH), Satra Ghosh (SG), Eric Larson (EL), Demian Wassermann, Stephan Gerhard and Ross Markello (RM). References like "pr/298" refer to github pull request numbers. Enhancements ------------ * Make `imagestats` available with ``import nibabel`` (pr/1208) (Fabian Perez, reviewed by CM) * Use symmetric threshold for identifying unit quaternions on qform calculations (pr/1182) (CM, reviewed by MB) * Type annotations for `nibabel.loadsave` (pr/1213) and `nibabel.spatialimages.SpatialImage` APIs (pr/1179), `nibabel.deprecated`, `nibabel.deprecator`, `nibabel.onetime` and `nibabel.optpkg` modules (pr/1188), `nibabel.volumeutils` (pr/1189), `nibabel.filename_parser` and `nibabel.openers` (pr/1197) (CM, reviewed by Zvi Baratz) Bug fixes --------- * Require explicit overrides to write GIFTI files that contain data arrays with data types not permitted by the GIFTI standard (pr/1199) (CM, reviewed by Alexis Thual) Maintenance ----------- * Move compression detection logic into a private ``nibabel._compression`` module, resolving unexpected errors from pyzstd. (pr/1212) (CM) * Improved consistency of docstring formatting (pr/1200) (Zvi Baratz, reviewed by CM) * Modernized README text (pr/1195) (Zvi Baratz, reviewed by CM) * Updated README badges to include package distributions (pr/1192) (Horea Christian, reviewed by CM) * Removed all dependencies on distutils and setuptools (pr/1190) (CM, reviewed by Zvi Baratz) * Add a ``_version.pyi`` stub to allow mypy to run without building nibabel (pr/1210) (CM) From garyfallidis at gmail.com Tue Apr 11 22:50:42 2023 From: garyfallidis at gmail.com (Eleftherios Garyfallidis) Date: Tue, 11 Apr 2023 22:50:42 -0400 Subject: [Neuroimaging] DIPY Workshop 2023 now to be held online! April 24-28. Message-ID: Dear all, Due to unexpected events we have had to make the decision to transition our workshop to a virtual format. While this change was unexpected, we are well-prepared due to our previous experience with our own online platform. Rest assured, we are fully equipped to ensure that the virtual workshop will run smoothly. It's worth noting that all talks this year will be conducted live, as opposed to pre-recorded. So now we are offering the following updated and flexible registration options: Silver : Starts from $200 1. Listen to the talks live. Learn from the experts. 2. 3 days workshop, get the basic kit to strive in the diffusion imaging world. 3. Ability to upgrade during the workshop. Gold : Starts from $500 Everything in Silver plus: 1. Ability to attend study groups and to present your work. 2. Full 5 days workshop. 3. Certificate of attendance (Linkedin verifiable). Platinum : Starts from $995 Everything in Gold plus: 1. Provides additional preset hourly meetings with the DIPY developers beyond the workshop's duration. These will be 1 to 1 meetings to set up or improve your pipeline for your needs. Maximum 6 meetings. Each meeting will be 1 hour long. 2. Provides access to the talks and all materials after the workshop. 3. Ability to move to yearly long support. Register now ! In summary, the workshop offers: - Hands-on tutorials - Every single day !!! - Guided practice sessions (bring your data) - Personalized certificates of attendance - Effective networking opportunities with one-to-one follow ups - Comprehensive explanation of theoretical foundations with practical examples - Access to latest and established methods with code and interfaces - Pointers to move beyond the current challenges and navigate hard to do analyses - Multiple clinical use cases (AZ, Parkinson?s, Stroke, etc.) This year there is a higher level of focus in AI and ML. These technologies have been transforming various industries, and now they are revolutionizing medical imaging. By harnessing the power of advanced algorithms and vast data sets, we have successfully integrated machine learning into our imaging solutions, providing unparalleled accuracy and efficiency. For those of you who are new to this. DIPY is an open source software project used for processing structural and diffusion imaging data. Join us for an exciting in person workshop hosted online April 24-28. https://dipy.org/workshops/latest Our team of expert instructors will guide you through the fundamentals of diffusion theory, data pre-processing, fiber tracking, and much more. You'll have the opportunity to learn from industry-leading professionals, ask questions, and network with like-minded peers. Register today to secure your spot in this highly anticipated event. Now online!! https://dipy.org/workshops/dipy-workshop-2023#Registration Happy to answer any questions you may have. Thank you!, DIPY team -------------- next part -------------- An HTML attachment was scrubbed... URL: From jg at dipy.org Fri Apr 14 20:58:12 2023 From: jg at dipy.org (jg at dipy.org) Date: Sat, 15 Apr 2023 00:58:12 -0000 Subject: [Neuroimaging] DIPY Workshop 2023! Now available online! MI/ML! April 24-28! Message-ID:



Dear Friend,

If you work on the area of machine learning with medical imaging applications this workshop is definitely for you.
https://dipy.org/workshops/latest






DIPY is a powerful software library for analyzing and processing medical imaging data. It is an open-source project with a large and active
community of contributors who are dedicated to advancing the field of medical imaging. The DIPY workshop provides an excellent opportunity
for individuals to learn how to use this software effectively. The workshop covers a broad range of topics, from basic concepts to advanced
techniques, and provides hands-on experience with the software. By attending the DIPY workshop, you will not only learn how to use this
powerful tool, but also gain a deeper understanding of diffusion imaging and machine learning for imaging in general. The workshop is led by
expert instructors who have extensive experience in both diffusion imaging and DIPY, so attendees can be confident that they are receiving
accurate and up-to-date information.

In summary, the workshop offers:

1. Hands-on tutorials - Every single day of the 5 days !!!
2. Guided practice sessions (bring your data - optional)
3. Personalized certificates of attendance
4. Effective networking opportunities with one-to-one follow ups
5. Comprehensive explanation of theoretical foundations with practical examples
6. Access to latest and established methods with code and interfaces
7. Pointers to move beyond the current challenges and navigate hard to do analyses
8. Multiple clinical use cases (AZ, Parkinson?s, MS, etc.)

Register now at https://dipy.org/workshops/latest#Registration

See you online!,
DIPY Team!




-------------- next part -------------- An HTML attachment was scrubbed... URL: From elef at indiana.edu Mon Apr 17 22:44:32 2023 From: elef at indiana.edu (Eleftherios Garyfallidis) Date: Mon, 17 Apr 2023 22:44:32 -0400 Subject: [Neuroimaging] DIPY Workshop 2023 - Financial Support Options Message-ID: Dear all, We hope this message finds you in good health and eagerly anticipating our upcoming online workshop, scheduled for April 24-28. We have recently received numerous requests for registration fee discounts from participants in countries facing economic challenges. At DIPY, we have always been committed to extending educational opportunities as far and wide as the internet can reach. Our organization takes pride in supporting talented students worldwide to pursue their aspirations, find rewarding careers, and contribute to cutting-edge research. In light of our mission, we are pleased to offer assistance to those facing financial difficulties. If you are in need of support, please contact Kelsey Daniel, our conference manager, and provide evidence of your current address (e.g. bill or driving license). Upon verification, Kelsey will supply you with a discount code for use during registration. We look forward to your active participation in the online workshop and are excited about the diverse perspectives that our global community brings to the table. Should you have any questions or require further information, please do not hesitate to reach out to Kelsey (CC'ed). Warm regards, Eleftherios -------------- next part -------------- An HTML attachment was scrubbed... URL: From jg at dipy.org Thu Apr 20 01:29:26 2023 From: jg at dipy.org (jg at dipy.org) Date: Thu, 20 Apr 2023 05:29:26 -0000 Subject: [Neuroimaging] DIPY Workshop 2023! Starts this Monday April 24, 9am PDT! Register Now! Message-ID:



Dear Friend,

The DIPY workshop starts this Monday April 24 at 9am PDT. This is an online workshop with multiple registration options
that allow you to attend the workshop and receive a certificate in every timezone.
https://dipy.org/workshops/latest






DIPY is a powerful software library for analyzing and processing medical imaging data. It is an open-source project with a large and active
community of contributors who are dedicated to advancing the field of medical imaging. The DIPY workshop provides an excellent opportunity
for individuals to learn how to use this software effectively. The workshop covers a broad range of topics, from basic concepts to advanced
techniques, and provides hands-on experience with the software. By attending the DIPY workshop, you will not only learn how to use this
powerful tool, but also gain a deeper understanding of diffusion imaging and machine learning for imaging in general. The workshop is led by
expert instructors who have extensive experience in both diffusion imaging and DIPY, so attendees can be confident that they are receiving
accurate and up-to-date information.

In summary, the workshop offers:

1. Hands-on tutorials - Every single day of the 5 days !!!
2. Guided practice sessions (bring your data - optional)
3. Personalized certificates of attendance
4. Effective networking opportunities with one-to-one follow ups
5. Comprehensive explanation of theoretical foundations with practical examples
6. Access to latest and established methods with code and interfaces
7. Pointers to move beyond the current challenges and navigate hard to do analyses
8. Multiple clinical use cases (AZ, Parkinson?s, MS, etc.)

Register now at https://dipy.org/workshops/latest#Registration

See you online!,
DIPY Team!
@dipymri




-------------- next part -------------- An HTML attachment was scrubbed... URL: From garyfallidis at gmail.com Thu Apr 20 18:06:22 2023 From: garyfallidis at gmail.com (Eleftherios Garyfallidis) Date: Thu, 20 Apr 2023 18:06:22 -0400 Subject: [Neuroimaging] DIPY Workshop 2023 - What to do if you live in a different timezone than PDT Message-ID: Dear all, We hope you are as excited as we are about the upcoming online DIPY workshop starting this Monday April 24 at 9 am PDT (LA time) ! As you make your plans to attend this educational event, we wanted to provide you with important information about the registration options available to ensure you get the most out of the workshop. To optimize your experience and accommodate different time zones, we highly recommend selecting the Platinum registration option. This will grant you full access to the workshop's recordings, allowing you to view them at your convenience. For example, if you are attending the DIPY workshop from Europe or Asia. While you will still be able to watch the early morning talks (PDT) live on the same day (late evening for you), choosing the Platinum option will enable you to watch the later afternoon (PDT) talks in the mornings of the subsequent days. For example, watch the late Monday talks on Tuesday morning. This is an excellent opportunity to catch up on any missed sessions and stay informed on the latest developments in the field. Additionally, Platinum registration comes with access to additional support and 1-to-1 meetings long after the workshop is completed. This will facilitate meaningful discussions and help you get the most out of the workshop. To register for the DIPY workshop and select the Platinum registration option, please visit here . We look forward to your participation and can't wait to see you there! If you are in financial hardship, be brave and ask for a discount. Please contact our conference manager Kelsey Daniel (cc'ed) for more information. Excited to see you all very soon! Best regards, Eleftherios Garyfallidis, PhD DIPY Workshop 2023 (Chair) Associate Professor Intelligent Systems Engineering Indiana University Luddy Hall 700 N Woodlawn Bloomington, IN 47408 GRG | DIPY | FURY -------------- next part -------------- An HTML attachment was scrubbed... URL: From garyfallidis at gmail.com Thu Apr 20 18:30:43 2023 From: garyfallidis at gmail.com (Eleftherios Garyfallidis) Date: Thu, 20 Apr 2023 18:30:43 -0400 Subject: [Neuroimaging] [EXT]DIPY Workshop 2023 - What to do if you live in a different timezone than PDT In-Reply-To: References: Message-ID: Yes, that is correct Dianne! Thank you for the clarification. See you online!! Kind regards, Eleftherios On Thu, Apr 20, 2023 at 6:27?PM Patterson, Dianne K - (dkp) wrote: > I am hoping that by "all materials" you mean copies of presentations and > tutorials, not just the videos? > > Thank you, > > Dianne > > Dianne Patterson, Ph.D > dkp at arizona.edu > Office: BSRL, Room 235 > RII Neuroimaging Staff Scientist > Program Coordinator Neuroimaging Methods Certificate > > Cognitive Science GIDP affiliate member > Faculty Lead OpenClass.ai > Mastodon: @dpat at scicomm.xyz > ------------------------------ > *From:* Eleftherios Garyfallidis > *Sent:* Thursday, April 20, 2023 3:06 PM > *To:* dipy at python.org ; Daniel, Kelsey ; > Neuroimaging analysis in Python > *Subject:* [EXT]DIPY Workshop 2023 - What to do if you live in a > different timezone than PDT > > > *External Email* > Dear all, > > We hope you are as excited as we are about the upcoming online DIPY > workshop starting this Monday April 24 at 9 am PDT (LA time) ! As you make > your plans to attend this educational event, we wanted to provide you with > important information about the registration options available to ensure > you get the most out of the workshop. > > To optimize your experience and accommodate different time zones, we > highly recommend selecting the Platinum registration option. This will > grant you full access to the workshop's recordings, allowing you to view > them at your convenience. > > For example, if you are attending the DIPY workshop from Europe or Asia. > While you will still be able to watch the early morning talks (PDT) live on > the same day (late evening for you), choosing the Platinum option will > enable you to watch the later afternoon (PDT) talks in the mornings of the > subsequent days. For example, watch the late Monday talks on Tuesday > morning. This is an excellent opportunity to catch up on any missed > sessions and stay informed on the latest developments in the field. > > Additionally, Platinum registration comes with access to additional > support and 1-to-1 meetings long after the workshop is completed. This will > facilitate meaningful discussions and help you get the most out of the > workshop. > > To register for the DIPY workshop and select the Platinum registration > option, please visit here > . We look > forward to your participation and can't wait to see you there! If you are > in financial hardship, be brave and ask for a discount. Please contact our > conference manager Kelsey Daniel (cc'ed) for more information. > > Excited to see you all very soon! > > Best regards, > Eleftherios Garyfallidis, PhD > DIPY Workshop 2023 (Chair) > Associate Professor > Intelligent Systems Engineering > Indiana University > Luddy Hall 700 N Woodlawn > Bloomington, IN 47408 > GRG | DIPY | FURY > > -------------- next part -------------- An HTML attachment was scrubbed... URL: From dkp at arizona.edu Thu Apr 20 18:27:09 2023 From: dkp at arizona.edu (Patterson, Dianne K - (dkp)) Date: Thu, 20 Apr 2023 22:27:09 +0000 Subject: [Neuroimaging] [EXT]DIPY Workshop 2023 - What to do if you live in a different timezone than PDT In-Reply-To: References: Message-ID: I am hoping that by "all materials" you mean copies of presentations and tutorials, not just the videos? Thank you, Dianne Dianne Patterson, Ph.D dkp at arizona.edu Office: BSRL, Room 235 RII Neuroimaging Staff Scientist Program Coordinator Neuroimaging Methods Certificate Cognitive Science GIDP affiliate member Faculty Lead OpenClass.ai Mastodon: @dpat at scicomm.xyz ________________________________ From: Eleftherios Garyfallidis Sent: Thursday, April 20, 2023 3:06 PM To: dipy at python.org ; Daniel, Kelsey ; Neuroimaging analysis in Python Subject: [EXT]DIPY Workshop 2023 - What to do if you live in a different timezone than PDT External Email Dear all, We hope you are as excited as we are about the upcoming online DIPY workshop starting this Monday April 24 at 9 am PDT (LA time) ! As you make your plans to attend this educational event, we wanted to provide you with important information about the registration options available to ensure you get the most out of the workshop. To optimize your experience and accommodate different time zones, we highly recommend selecting the Platinum registration option. This will grant you full access to the workshop's recordings, allowing you to view them at your convenience. For example, if you are attending the DIPY workshop from Europe or Asia. While you will still be able to watch the early morning talks (PDT) live on the same day (late evening for you), choosing the Platinum option will enable you to watch the later afternoon (PDT) talks in the mornings of the subsequent days. For example, watch the late Monday talks on Tuesday morning. This is an excellent opportunity to catch up on any missed sessions and stay informed on the latest developments in the field. Additionally, Platinum registration comes with access to additional support and 1-to-1 meetings long after the workshop is completed. This will facilitate meaningful discussions and help you get the most out of the workshop. To register for the DIPY workshop and select the Platinum registration option, please visit here. We look forward to your participation and can't wait to see you there! If you are in financial hardship, be brave and ask for a discount. Please contact our conference manager Kelsey Daniel (cc'ed) for more information. Excited to see you all very soon! Best regards, Eleftherios Garyfallidis, PhD DIPY Workshop 2023 (Chair) Associate Professor Intelligent Systems Engineering Indiana University Luddy Hall 700 N Woodlawn Bloomington, IN 47408 GRG | DIPY | FURY -------------- next part -------------- An HTML attachment was scrubbed... URL: From diannepat at gmail.com Thu Apr 20 21:36:27 2023 From: diannepat at gmail.com (Dianne Patterson) Date: Thu, 20 Apr 2023 18:36:27 -0700 Subject: [Neuroimaging] [DIPY] Re: [EXT]DIPY Workshop 2023 - What to do if you live in a different timezone than PDT In-Reply-To: References: Message-ID: Fantastic! Thank you. -Dianne On Thu, Apr 20, 2023 at 3:35?PM Eleftherios Garyfallidis < garyfallidis at gmail.com> wrote: > Yes, that is correct Dianne! Thank you for the clarification. > > See you online!! > > Kind regards, > Eleftherios > > On Thu, Apr 20, 2023 at 6:27?PM Patterson, Dianne K - (dkp) < > dkp at arizona.edu> wrote: > >> I am hoping that by "all materials" you mean copies of presentations and >> tutorials, not just the videos? >> >> Thank you, >> >> Dianne >> >> Dianne Patterson, Ph.D >> dkp at arizona.edu >> Office: BSRL, Room 235 >> RII Neuroimaging Staff Scientist >> Program Coordinator Neuroimaging Methods Certificate >> >> Cognitive Science GIDP affiliate member >> Faculty Lead OpenClass.ai >> Mastodon: @dpat at scicomm.xyz >> ------------------------------ >> *From:* Eleftherios Garyfallidis >> *Sent:* Thursday, April 20, 2023 3:06 PM >> *To:* dipy at python.org ; Daniel, Kelsey ; >> Neuroimaging analysis in Python >> *Subject:* [EXT]DIPY Workshop 2023 - What to do if you live in a >> different timezone than PDT >> >> >> *External Email* >> Dear all, >> >> We hope you are as excited as we are about the upcoming online DIPY >> workshop starting this Monday April 24 at 9 am PDT (LA time) ! As you make >> your plans to attend this educational event, we wanted to provide you with >> important information about the registration options available to ensure >> you get the most out of the workshop. >> >> To optimize your experience and accommodate different time zones, we >> highly recommend selecting the Platinum registration option. This will >> grant you full access to the workshop's recordings, allowing you to view >> them at your convenience. >> >> For example, if you are attending the DIPY workshop from Europe or Asia. >> While you will still be able to watch the early morning talks (PDT) live on >> the same day (late evening for you), choosing the Platinum option will >> enable you to watch the later afternoon (PDT) talks in the mornings of the >> subsequent days. For example, watch the late Monday talks on Tuesday >> morning. This is an excellent opportunity to catch up on any missed >> sessions and stay informed on the latest developments in the field. >> >> Additionally, Platinum registration comes with access to additional >> support and 1-to-1 meetings long after the workshop is completed. This will >> facilitate meaningful discussions and help you get the most out of the >> workshop. >> >> To register for the DIPY workshop and select the Platinum registration >> option, please visit here >> . We look >> forward to your participation and can't wait to see you there! If you are >> in financial hardship, be brave and ask for a discount. Please contact our >> conference manager Kelsey Daniel (cc'ed) for more information. >> >> Excited to see you all very soon! >> >> Best regards, >> Eleftherios Garyfallidis, PhD >> DIPY Workshop 2023 (Chair) >> Associate Professor >> Intelligent Systems Engineering >> Indiana University >> Luddy Hall 700 N Woodlawn >> Bloomington, IN 47408 >> GRG | DIPY | FURY >> >> > _______________________________________________ > DIPY mailing list -- dipy at python.org > To unsubscribe send an email to dipy-leave at python.org > https://mail.python.org/mailman3/lists/dipy.python.org/ > Member address: diannepat at gmail.com > -- Dianne Patterson diannepat at gmail.com -------------- next part -------------- An HTML attachment was scrubbed... URL: From yasmin.mzayek at inria.fr Fri Apr 28 08:41:26 2023 From: yasmin.mzayek at inria.fr (Yasmin Mzayek) Date: Fri, 28 Apr 2023 14:41:26 +0200 (CEST) Subject: [Neuroimaging] Nilearn 0.10.1 release Message-ID: <1812256389.7929399.1682685686340.JavaMail.zimbra@inria.fr> Dear all, We have just released Nilearn 0.10.1! This is a minor release but we do have some exciting new plotting features: - Surface plotting methods no longer automatically rescale background maps, which, among other things, allows to use curvature sign as a background map - fsaverage meshes accessed through [ https://nilearn.github.io/stable/modules/generated/nilearn.datasets.fetch_surf_fsaverage.html#nilearn.datasets.fetch_surf_fsaverage | fetch_surf_fsaverage ] now come with flat maps for all resolutions - Surface plotting functions allow setting custom view angles and are no longer limited to predefined views You can see the full changelog of this release here: [ https://nilearn.github.io/stable/changes/whats_new.html#id1 | https://nilearn.github.io/stable/changes/whats_new.html#id1 ] Big thanks to all the contributors! You can install nilearn with (recommended in a virtual environment): python -m pip install -U nilearn We look forward to hearing your feedback! Best regards, Yasmin Mzayek On behalf of the Nilearn team -------------- next part -------------- An HTML attachment was scrubbed... URL: From jbpoline at gmail.com Fri Apr 28 09:03:02 2023 From: jbpoline at gmail.com (JB Poline) Date: Fri, 28 Apr 2023 09:03:02 -0400 Subject: [Neuroimaging] Nilearn 0.10.1 release In-Reply-To: <1812256389.7929399.1682685686340.JavaMail.zimbra@inria.fr> References: <1812256389.7929399.1682685686340.JavaMail.zimbra@inria.fr> Message-ID: This is great, thanks a lot to the dev team ! JB On Fri, Apr 28, 2023 at 8:57?AM Yasmin Mzayek wrote: > Dear all, > > We have just released Nilearn 0.10.1! > > This is a minor release but we do have some exciting new plotting features: > > - Surface plotting methods no longer automatically rescale background > maps, which, among other things, allows to use curvature sign as a > background map > - fsaverage meshes accessed through fetch_surf_fsaverage > > now come with flat maps for all resolutions > - Surface plotting functions allow setting custom view angles and are no > longer limited to predefined views > > You can see the full changelog of this release here: > > https://nilearn.github.io/stable/changes/whats_new.html#id1 > > > Big thanks to all the contributors! > > > You can install nilearn with (recommended in a virtual environment): > > > python -m pip install -U nilearn > > > We look forward to hearing your feedback! > > > Best regards, > > Yasmin Mzayek > > On behalf of the Nilearn team > _______________________________________________ > Neuroimaging mailing list > Neuroimaging at python.org > https://mail.python.org/mailman/listinfo/neuroimaging > -------------- next part -------------- An HTML attachment was scrubbed... URL: From bertrand.thirion at inria.fr Fri Apr 28 13:29:02 2023 From: bertrand.thirion at inria.fr (Bertrand Thirion) Date: Fri, 28 Apr 2023 19:29:02 +0200 Subject: [Neuroimaging] Nilearn 0.10.1 release In-Reply-To: <1812256389.7929399.1682685686340.JavaMail.zimbra@inria.fr> References: <1812256389.7929399.1682685686340.JavaMail.zimbra@inria.fr> Message-ID: <4c306bf1-ac08-800e-f967-c4ff4c74ec42@inria.fr> Congrats for the release ! Bertrand Le 28/04/2023 ? 14:41, Yasmin Mzayek a ?crit?: > > Dear all, > > > We have just released Nilearn 0.10.1! > > This is a minor release but we do have some exciting new plotting > features: > > - Surface plotting methods no longer automatically rescale background > maps, which, among other things, allows to use curvature sign as a > background map > - fsaverage meshes accessed through |fetch_surf_fsaverage| > > now come with flat maps for all resolutions > - Surface plotting functions allow setting custom view angles and are > no longer limited to predefined views > > You can see the full changelog of this release here: > > https://nilearn.github.io/stable/changes/whats_new.html#id1 > > > Big thanks to all the contributors! > > > You can install nilearn with (recommended in a virtual environment): > > > ??????? python -m pip install -U nilearn > > > We look forward to hearing your feedback! > > > Best regards, > > Yasmin Mzayek > > On behalf of the Nilearn team > > > _______________________________________________ > Neuroimaging mailing list > Neuroimaging at python.org > https://mail.python.org/mailman/listinfo/neuroimaging -------------- next part -------------- An HTML attachment was scrubbed... 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