From alexandre.gramfort at inria.fr  Thu Oct 13 06:47:20 2022
From: alexandre.gramfort at inria.fr (Alexandre Gramfort)
Date: Thu, 13 Oct 2022 12:47:20 +0200
Subject: [Neuroimaging] ANN MNE-Python 1.2 is out
Message-ID: <CADeotZoRF4Q7k7DHV-EOcYWVyLiXVv+vfG_M9FT-UTNN=1L5jQ@mail.gmail.com>

Yesterday we released MNE-Python version 1.2, available now on PyPI
<https://pypi.org/project/mne/1.2.0/> and conda-forge.

This release includes contributions from 30 contributors including *11
first-time contributors*: Andrew Quinn, Chetan Gohil, Daniel Carlstr?m
Schad, Dominik Wetzel, H?seyin Orkun Elmas, Julius Welzel, Mats van Es,
Moritz Gerster, Sebastiaan Mathot, Sena Er, and luzpaz. Thanks all!

Notable changes:

   -

   new option to compute forward solutions using symmetric BEM method via
   OpenMEEG <https://openmeeg.github.io/>
   -

   new classes Spectrum and EpochsSpectrum created via new methods
   Raw.compute_psd(), Epochs.compute_psd(), and Evoked.compute_psd(). These
   replace the functions psd_welch() and psd_multitaper() which are now
   deprecated.
   -

   new method for ICA objects: get_explained_variance_ratio()
   -

   cross-talk and point-spread can now be computed for vector and
   volume-vector source estimates
   -

   new class EOGRegression and corresponding example
   <https://mne.tools/stable/auto_examples/preprocessing/eog_regression.html>
   -

   common average referencing is now possible with ECoG, sEEG, and DBS data
   -

   parameter standardization for functions and methods that generate
   topomaps. Most prominently, colormap limits vmin and vmax are replaced
   by a tuple vlim, and the title parameter is deprecated (use matplotlib?s
   ax.set_title() or fig.suptitle() instead).
   -

   new channel types temperature and gsr (galvanic skin response)

The full changelog is available here
<https://mne.tools/dev/whats_new.html#version-1-2-0-2022-10-11>.

As always, please feel free to ask usage questions here on our Discourse
forum or during bi-weekly office hours on our Discord server
<https://discord.gg/rKfvxTuATa>, and report bugs and feature requests on our
 GitHub repository
<https://github.com/mne-tools/mne-python/issues/new/choose>.

--

Alex
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From bertrand.thirion at inria.fr  Thu Oct 13 09:22:36 2022
From: bertrand.thirion at inria.fr (Bertrand Thirion)
Date: Thu, 13 Oct 2022 15:22:36 +0200 (CEST)
Subject: [Neuroimaging] ANN MNE-Python 1.2 is out
In-Reply-To: <CADeotZoRF4Q7k7DHV-EOcYWVyLiXVv+vfG_M9FT-UTNN=1L5jQ@mail.gmail.com>
References: <CADeotZoRF4Q7k7DHV-EOcYWVyLiXVv+vfG_M9FT-UTNN=1L5jQ@mail.gmail.com>
Message-ID: <130322580.15561632.1665667356093.JavaMail.zimbra@inria.fr>

Congrats ! 
Bertrand 

> De: "Alexandre Gramfort" <alexandre.gramfort at inria.fr>
> ?: "Neuroimaging analysis in Python" <neuroimaging at python.org>
> Envoy?: Jeudi 13 Octobre 2022 12:47:20
> Objet: [Neuroimaging] ANN MNE-Python 1.2 is out

> Yesterday we released MNE -Python version 1.2, available now on [
> https://pypi.org/project/mne/1.2.0/ | PyPI ] and conda-forge.

> This release includes contributions from 30 contributors including 11 first-time
> contributors : Andrew Quinn, Chetan Gohil, Daniel Carlstr?m Schad, Dominik
> Wetzel, H?seyin Orkun Elmas, Julius Welzel, Mats van Es, Moritz Gerster,
> Sebastiaan Mathot, Sena Er, and luzpaz. Thanks all!

> Notable changes:

>     *

> new option to compute forward solutions using symmetric BEM method via [
> https://openmeeg.github.io/ | OpenMEEG ]
>     *

> new classes Spectrum and EpochsSpectrum created via new methods
> Raw.compute_psd(), Epochs.compute_psd(), and Evoked.compute_psd(). These
> replace the functions psd_welch() and psd_multitaper() which are now
> deprecated.
>     *

> new method for ICA objects: get_explained_variance_ratio()
>     *

> cross-talk and point-spread can now be computed for vector and volume-vector
> source estimates
>     *

> new class EOGRegression and [
> https://mne.tools/stable/auto_examples/preprocessing/eog_regression.html |
> corresponding example ]
>     *

> common average referencing is now possible with ECoG, sEEG, and DBS data
>     *

> parameter standardization for functions and methods that generate topomaps. Most
> prominently, colormap limits vmin and vmax are replaced by a tuple vlim , and
> the title parameter is deprecated (use matplotlib?s ax.set_title() or
> fig.suptitle() instead).
>     *

> new channel types temperature and gsr (galvanic skin response)

> The full changelog is [
> https://mne.tools/dev/whats_new.html#version-1-2-0-2022-10-11 | available here
> ] .

> As always, please feel free to ask usage questions here on our Discourse forum
> or during bi-weekly office hours on our [ https://discord.gg/rKfvxTuATa |
> Discord server ] , and report bugs and feature requests on our [
> https://github.com/mne-tools/mne-python/issues/new/choose | GitHub?repository ]
> .

> --

> Alex

> _______________________________________________
> Neuroimaging mailing list
> Neuroimaging at python.org
> https://mail.python.org/mailman/listinfo/neuroimaging
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From jbpoline at gmail.com  Thu Oct 13 09:28:35 2022
From: jbpoline at gmail.com (JB Poline)
Date: Thu, 13 Oct 2022 09:28:35 -0400
Subject: [Neuroimaging] ANN MNE-Python 1.2 is out
In-Reply-To: <130322580.15561632.1665667356093.JavaMail.zimbra@inria.fr>
References: <CADeotZoRF4Q7k7DHV-EOcYWVyLiXVv+vfG_M9FT-UTNN=1L5jQ@mail.gmail.com>
 <130322580.15561632.1665667356093.JavaMail.zimbra@inria.fr>
Message-ID: <CALMaa82kSUyFvgCM-ooiRUc6uDTQ-OwEzROBrmqSZGLfmOYSHQ@mail.gmail.com>

Congrats indeed :)
JB

On Thu, Oct 13, 2022 at 9:23 AM Bertrand Thirion <bertrand.thirion at inria.fr>
wrote:

> Congrats !
> Bertrand
>
> ------------------------------
>
> *De: *"Alexandre Gramfort" <alexandre.gramfort at inria.fr>
> *?: *"Neuroimaging analysis in Python" <neuroimaging at python.org>
> *Envoy?: *Jeudi 13 Octobre 2022 12:47:20
> *Objet: *[Neuroimaging] ANN MNE-Python 1.2 is out
>
> Yesterday we released MNE-Python version 1.2, available now on PyPI
> <https://pypi.org/project/mne/1.2.0/> and conda-forge.
>
> This release includes contributions from 30 contributors including *11
> first-time contributors*: Andrew Quinn, Chetan Gohil, Daniel Carlstr?m
> Schad, Dominik Wetzel, H?seyin Orkun Elmas, Julius Welzel, Mats van Es,
> Moritz Gerster, Sebastiaan Mathot, Sena Er, and luzpaz. Thanks all!
>
> Notable changes:
>
>    -
>
>    new option to compute forward solutions using symmetric BEM method via
>    OpenMEEG <https://openmeeg.github.io/>
>    -
>
>    new classes Spectrum and EpochsSpectrum created via new methods
>    Raw.compute_psd(), Epochs.compute_psd(), and Evoked.compute_psd(). These
>    replace the functions psd_welch() and psd_multitaper() which are now
>    deprecated.
>    -
>
>    new method for ICA objects: get_explained_variance_ratio()
>    -
>
>    cross-talk and point-spread can now be computed for vector and
>    volume-vector source estimates
>    -
>
>    new class EOGRegression and corresponding example
>    <https://mne.tools/stable/auto_examples/preprocessing/eog_regression.html>
>    -
>
>    common average referencing is now possible with ECoG, sEEG, and DBS
>    data
>    -
>
>    parameter standardization for functions and methods that generate
>    topomaps. Most prominently, colormap limits vmin and vmax are replaced
>    by a tuple vlim, and the title parameter is deprecated (use
>    matplotlib?s ax.set_title() or fig.suptitle() instead).
>    -
>
>    new channel types temperature and gsr (galvanic skin response)
>
> The full changelog is available here
> <https://mne.tools/dev/whats_new.html#version-1-2-0-2022-10-11>.
>
> As always, please feel free to ask usage questions here on our Discourse
> forum or during bi-weekly office hours on our Discord server
> <https://discord.gg/rKfvxTuATa>, and report bugs and feature requests on
> our GitHub repository
> <https://github.com/mne-tools/mne-python/issues/new/choose>.
>
> --
>
> Alex
>
>
>
> _______________________________________________
> Neuroimaging mailing list
> Neuroimaging at python.org
> https://mail.python.org/mailman/listinfo/neuroimaging
>
> _______________________________________________
> Neuroimaging mailing list
> Neuroimaging at python.org
> https://mail.python.org/mailman/listinfo/neuroimaging
>
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From yasmin.mzayek at inria.fr  Mon Oct 24 07:41:28 2022
From: yasmin.mzayek at inria.fr (Yasmin Mzayek)
Date: Mon, 24 Oct 2022 13:41:28 +0200 (CEST)
Subject: [Neuroimaging] Nilearn developer position
Message-ID: <1852967396.2187627.1666611688175.JavaMail.zimbra@inria.fr>

Dear all, 

There is an open developer position with the Nilearn team which will be based in Montreal. 

You can find a full description here: 
[ https://github.com/nilearn/nilearn/issues/3387 | https://github.com/nilearn/nilearn/issues/3387 ] 

Please feel free to share it within your networks. 

Kind regards, 
Yasmin 
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