[Neuroimaging] [DIPY] pip question

Megan Schendel mschendel at mrn.org
Fri Sep 4 16:37:30 EDT 2020


Hi Mathew,
Thank you for the suggestions, I'll give them a try.

Megan
MEG Technician
The Mind Research Network
1101 Yale Blvd. NE
Albuquerque, New Mexico 87106



On Fri, Sep 4, 2020 at 2:57 AM Matthew Brett <matthew.brett at gmail.com>
wrote:

> Hi,
>
> On Thu, Sep 3, 2020 at 10:29 PM Megan Schendel <mschendel at mrn.org> wrote:
> >
> > Hi all,
> > I am following instructions from the mne python conda environment to
> update.  It includes...
> > dependencies:
> > - pip:
> >   - dipy --only-binary dipy
> >
> > Below is the conda update command, and later, the error when it tries to
> do the dipy update.
> > Should I change the line of the environment.yml file?
> > FYI, I have a previous installation showing dipy... and your
> instructions say to remove that before trying to update.
> >
> > Does the environment.yml line need to be changed?
> > Thanks for any help/advice.
> > Megan Schendel
> >
> > From terminal:
> > conda env update --file environment.yml
> > Using Anaconda Cloud api site https://api.anaconda.org
> > Fetching package metadata ...........
> > Solving package specifications: .
> > ...
> > ERROR: Invalid requirement: 'dipy --only-binary dipy'
>
> I don't use conda myself - but I guess that line must be wrong, and
> you need to drop either the first or the second 'dipy' , as in:
>
> dependencies:
>  - pip:
>    - --only-binary dipy
>
> or:
>
> dependencies:
>  - pip:
>    - dipy --only-binary
>
> Cheers,
>
> Matthew
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>
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