[Neuroimaging] [ANN] MNE-Python 0.20

bthirion bertrand.thirion at inria.fr
Sat Mar 28 04:59:22 EDT 2020


Congratulations for all the plotting improvements.
B

On 28/03/2020 09:47, Alexandre Gramfort wrote:
>
> Hi,
>
>
> First we hope that you’re safe in these troubled times.
>
>
> We are pleased to announce the new 0.20 release of MNE-Python 
> (https://mne.tools/ <https://mne.tools/stable/index.html>)
>
>
> A few highlights
>
> ============
>
>  *
>
>     PyVista 0.24 is now available for 3D plotting (alternative to
>     mayavi). This is a big step forward for source space data
>     visualization that allows users to explore time interactively,
>     pick vertices to view their time activation courses, (auto-)adjust
>     color scales, etc. To use it, `pip install -U pyvista` and then in
>     your Python script do `mne.viz.set_3d_backend(‘pyvista’)`. You
>     should then be good to go: Simply plot your source-time course
>     data via stc.plot(), and the improved interface should open
>     automatically!
>
>  *
>
>     Automatic estimation of head motion from cHPI MEG coils in the
>     mne.chpi namespace.
>
>  *
>
>     Automatic detection of bad (flat or overly noisy) MEG channels via
>     the new find_bad_channels_maxwell function
>
>  *
>
>     New topography plotting code to take into account head position
>     and deal properly with channel subsets
>
>  *
>
>     New function and tutorial for estimating source-power from
>     covariance matrices using MNE (as commonly done with a beamformer).
>
>  *
>
>     Extensive improvements to the narrative documentation
>     https://mne.tools/stable/auto_tutorials/index.html
>
>
> Notable API changes
>
> ================
>
>  *
>
>     Sensors shown in relationship to a head circle, as in topomap
>     plotting, are now systematically converted from their given
>     physical locations. Using a static layout (such as those typically
>     used with topo plots) has been deprecated.
>
>
> For a full list of improvements and API changes, see:
>
>
> https://mne.tools/stable/whats_new.html#version-0-20
>
>
> To install the latest release the following command should do the job:
>
>
> pip install --upgrade --user mne
>
>
> As usual we welcome your bug reports, feature requests, critiques, and
>
> contributions.
>
>
> Some links:
>
>
> -https://github.com/mne-tools/mne-python 
> <https://github.com/mne-tools/mne-python>(code + readme on how to install)
>
> -<http://martinos.org/mne/stable/>https://mne.tools/ 
> <https://mne.tools/stable/index.html>(full MNE documentation)
>
>
> Follow us on Twitter:https://twitter.com/mne_news 
> <https://twitter.com/mne_news>
>
>
> Stay safe and take care !
>
>
> Regards,
>
> The MNE-Python developers
>
>
> People who contributed to this release (in alphabetical order):
>
>
>  *
>
>     Adam Li
>
>  *
>
>     Adonay Nunes
>
>  *
>
>     Alex Rockhill
>
>  *
>
>     Alexandre Gramfort
>
>  *
>
>     Ariel Rokem
>
>  *
>
>     Britta Westner
>
>  *
>
>     Carlos de la Torre
>
>  *
>
>     Christian Brodbeck
>
>  *
>
>     Christian O’Reilly
>
>  *
>
>     Chun-Hui Li
>
>  *
>
>     Clemens Brunner
>
>  *
>
>     Daniel McCloy
>
>  *
>
>     Demetres Kostas
>
>  *
>
>     Denis A. Engemann
>
>  *
>
>     Dmitrii Altukhov
>
>  *
>
>     Dominik Welke
>
>  *
>
>     Eric Larson
>
>  *
>
>     Ezequiel Mikulan
>
>  *
>
>     Fahimeh Mamashli
>
>  *
>
>     Fede Raimondo
>
>  *
>
>     Fu-Te Wong
>
>  *
>
>     Geoff Brookshire
>
>  *
>
>     Guillaume Favelier
>
>  *
>
>     Henrich Kolkhorst
>
>  *
>
>     Joan Massich
>
>  *
>
>     José C. García Alanis
>
>  *
>
>     Jussi Nurminen
>
>  *
>
>     Kaisu Lankinen
>
>  *
>
>     Luke Bloy
>
>  *
>
>     Mainak Jas
>
>  *
>
>     Marijn van Vliet
>
>  *
>
>     Mathurin Massias
>
>  *
>
>     Mikolaj Magnuski
>
>  *
>
>     Mohamed Sherif
>
>  *
>
>     Mohammad Daneshzand
>
>  *
>
>     Nataliia Kozhemiako
>
>  *
>
>     Nicolas Barascud
>
>  *
>
>     Nicolas Legrand
>
>  *
>
>     Olaf Hauk
>
>  *
>
>     Padma Sundaram
>
>  *
>
>     Ramiro Gatti
>
>  *
>
>     Richard Höchenberger
>
>  *
>
>     Robert Luke
>
>  *
>
>     Robert Oostenveld
>
>  *
>
>     Sebastian Major
>
>  *
>
>     Sophie Herbst
>
>  *
>
>     Stefan Appelhoff
>
>  *
>
>     Stefan Repplinger
>
>  *
>
>     Thomas Hartmann
>
>  *
>
>     Victor Férat
>
>  *
>
>     Yu-Han Luo
>
>
>
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