[Neuroimaging] Spike sorting with tridesclous : release 1.0.0

Alexandre Gramfort alexandre.gramfort at inria.fr
Tue Sep 4 14:57:43 EDT 2018


congrats Samuel !

Alex

On Tue, Sep 4, 2018 at 4:42 PM Samuel Garcia <samuel.garcia at cnrs.fr> wrote:

> Dear all,
>
> I'm pleased to announce the v1.0.0 release of tridesclous
> <https://tridesclous.readthedocs.io/en/latest/>.
>
> This tools could interest researcher that use multi electrode cellular
> electrophysiology recordings.
>
> Tridesclous is a tool for *spike sorting* written in python.
>
>
> Features:
>
>    - can be used *offline* with several formats (binary raw, blackrock,
>    neuralynx, plexon, tdt...)
>    - can be used *online* with pyacq with several hardware (NI, MCC,
>    blackrock, multichannel, ...)
>    - methods based on mix of "legacy clustering" + "template matching",
>    so it resolve spike collision
>    - well design user interface (UI) with multi view. This allow fast and
>    precise check of isolated neurons.
>    - 2 level for users : script or UI
>    - usable from several channel (tetrodes) to some hundreds of channels
>    (dense arrays)
>    - can use GPU (with opencl) for some step of processing, so it can be
>    fast
>    - quick start guide with open data
>    - 100% open source
>
>
> Doc: https://tridesclous.readthedocs.io/en/latest/
>
> Code: https://github.com/tridesclous/tridesclous
>
>
> Best,
>
>
> Samuel
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