[Neuroimaging] [ANN] MNE-Python 0.17

[Satrajit Ghosh]

great to see all these new releases! keep up the good work!

cheers,

satra

On Tue, Nov 20, 2018 at 6:17 AM Alexandre Gramfort <
alexandre.gramfort at inria.fr> wrote:

> Dear community,
>
> We are very pleased to announce the new 0.17 release of MNE-Python
> (http://martinos.org/mne/stable/).
>
> A few highlights
> ============
> - This release will be the last release compatible with Python 2. The
> next version will be Python 3.5+ only.
> - Better support for Annotations, including readers for EEGLAB,
> BrainVision, EDF, CSV, TXT and Brainstorm formats, and a new tutorial
> in the documentation to dive in.
> - Better support to import data from FieldTrip and Neurmag 122 systems.
> - Add capability to read and save Epochs containing complex data (e.g.
> after Hilbert transform).
> - Add optically pumped magnetometer dataset and examples.
> - New source morph object to unify morphing any type of source
> estimates (surface or volume) from one subject to another for group
> studies. It is now possible to do group studies when working on the
> volume with MNE.
> - Add ability to read and write beamformers.
> - New source power spectral estimation example for resting-state data
> - Better support for Reports, now they can be load/saved in HDF5 and
> the existing figures from a report can be removed.
> - Add support for reading MATLAB v7.3+ for EEGLAB.
> - Add interactive visualization of volume source estimates using
> plot_volume_source_estimates
> - New BIDS-compatible raw filename construction
> - Better helmet visualization for Artemis123 and CTF
>
> Notable API changes
> ================
> - Deprecation of annot and annotmap parameters in mne.io.read_raw_edf
> - Deprecated mne.SourceEstimate.morph_precomputed,
> mne.SourceEstimate.morph, mne.compute_morph_matrix,
> mne.morph_data_precomputed and mne.morph_data in favor of
> mne.compute_source_morph
> - Calling mne.Epochs.decimate no longer copies the data when decim=1.
> - Warning messages are now only logged when warn_explicit is set
> (unless a logging file is being used) to avoid duplicate warning
> messages.
> - src.kind now equals to 'mixed' (and not 'combined') for a mixed
> source space (i.e., made of surfaces and volume grids)
> - The default value of stop_receive_thread in
> mne.realtime.RtEpochs.stop has been changed to True
> - Using the mne.io.Raw.add_channels on an instance with memmapped data
> will now resize the memmap file to append the new channels on Windows
> and Linux
> - Mismatches in CTF compensation grade are now checked in inverse
> computation
>
> For a full list of improvements and API changes, see:
>
> http://martinos.org/mne/stable/whats_new.html#version-0-17
>
> To install the latest release the following command should do the job:
>
>     $ pip install --upgrade mne
>
> As usual, we welcome your bug reports, feature requests, critiques,
> and contributions.
>
> Some links:
> - https://github.com/mne-tools/mne-python (code + readme on how to
> install)
> - http://martinos.org/mne/stable/ (full MNE documentation)
>
> Follow us on Twitter: https://twitter.com/mne_news
>
> Regards,
> The MNE-Python developers
>
> 40 people made commits that contributed to this release (in alphabetical
> order):
>
> * Alexandre Gramfort
> * Antoine Gauthier
> * Britta Westner
> * Christian Brodbeck
> * Clemens Brunner
> * Daniel McCloy
> * David Sabbagh
> * Denis A. Engemann
> * Eric Larson
> * Ezequiel Mikulan
> * Henrich Kolkhorst
> * Hubert Banville
> * Jasper J.F. van den Bosch
> * Jen Evans
> * Joan Massich
> * Johan van der Meer
> * Jona Sassenhagen
> * Kambiz Tavabi
> * Lorenz Esch
> * Luke Bloy
> * MJAS1
> * Mainak Jas
> * Marcin Koculak
> * Marijn van Vliet
> * Peter J. Molfese
> * Sam Perry
> * Sara Sommariva
> * Sergey Antopolskiy
> * Sheraz Khan
> * Stefan Appelhoff
> * Stefan Repplinger
> * Steven Bethard
> * Teekuningas
> * Teon Brooks
> * Thomas Hartmann
> * Thomas Jochmann
> * Tom Dupré la Tour
> * Tristan Stenner
> * buildqa
> * jeythekey
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