[Neuroimaging] Interest in modeling library for NiPy

Boris BURLE boris.burle at univ-amu.fr
Fri Nov 4 14:54:55 EDT 2016


On 04/11/2016 15:50, Marmaduke Woodman wrote:
> hi
>
> I'm writing to poll for interest in a community oriented, NiPy-brand 
> modeling library [1], for generic dynamical systems models such as 
> those in DCM but also more realistic models e.g.  neural mass models, 
> DWI connectome based networks thereof, forward models for 
> fMRI/EEG/MEG. Methods therein would include both forward simulation 
> schemes (Euler-Maruyama etc) and model inversion using e.g. HMC or 
> variational schemes in PyMC3.
>
> Most these elements are already implemented, across various NiPy libs 
> and TVB, but the
>  hope would be to make their cross-section, ie. nonlinear dynamical 
> network modeling, a more accessible tool in the neuroimaging toolbox, 
> by forming a library bringing all those elements together.
>
>
> Any questions, suggestions, criticisms are welcome.
>
> Marmaduke Woodman
>
I would be MUCH interested !!
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