[Neuroimaging] Nipy 0.4.0, finally

Ian Charest charest.ian at gmail.com
Mon Oct 19 01:55:36 EDT 2015


Congratulations!

On Sun, 18 Oct 2015 22:25 Eleftherios Garyfallidis <garyfallidis at gmail.com>
wrote:

> Keep it up guys! Good job! :)
>
> On Sun, Oct 18, 2015 at 2:06 PM, bthirion <bertrand.thirion at inria.fr>
> wrote:
>
>>     Hi Matthew,
>>
>> Thank you for this last release.
>> Best,
>>
>> Bertrand
>>
>>
>> On 18/10/2015 07:20, Matthew Brett wrote:
>>
>>> Hi,
>>>
>>> I am pleased and relieved to announce the 0.4.0 release of nipy.
>>>
>>> Here's the changelog:
>>>
>>> Abbreviated authors are:
>>>
>>> * MB - Matthew Brett
>>> * BT - Bertrand Thirion
>>> * AR - Alexis Roche
>>> * YH - Yarik Halchenko
>>> * JBP - Jean-Baptiste Poline
>>> * JT - Jonathan Taylor
>>>
>>> * 0.4.0 (Saturday 18 October 2015)
>>>
>>>    * Bugfix, refactoring and compatibility release;
>>>    * Full port to Python 3 using single code-base;
>>>    * Various fixes for modern numpy, scipy, sympy, nibabel compatibility;
>>>    * Refactor space-time realignment (AR);
>>>    * Change in interface for slice-timing options in space-time realign
>>>      (AR+MB);
>>>    * New ``nipy_4d_realign`` script to run space-time realign (Ariel
>>> Rokem);
>>>    * Drop requirement for BLAS / LAPACK external library at build-time
>>> (AR);
>>>    * Move much code out of nipy.labs into main tree (AR, BT);
>>>    * Deprecate remaining code in nipy.labs (AR, BT);
>>>    * Updates to landmark learning code including API (BT);
>>>    * Various fixes to design matrix machinery (BT, Michael Waskom);
>>>    * Fix to two-sample permutation test suggested by github user
>>> jwirsich (BF);
>>>    * Refactoring and fixes to design matrix drift calculations (JBP);
>>>    * Extending API of resampling code to allow more ndimage kwargs (JBP);
>>>    * Start of new example on OpenFMRI ds105 dataset (JT);
>>>    * New ``block_design`` function for designs with specified onsets
>>> (JT);
>>>    * New ``show_contrast`` function for reviewing contrasts (JT);
>>>    * Fix for bug in ``nipy_diagnose`` script / ``screens`` module giving
>>>      incorrect PCA output;
>>>    * Added SPM HRF to other HRF options;
>>>    * Redesign concept of an image "space" with new image space modules,
>>>      functions, classes;
>>>    * Various fixes for correct installation provided or suggested by YH;
>>>    * Some visualization changes by Elvis Dohmatob;
>>>
>>> The latest source and wheels should be up on pypi in in :
>>>
>>> https://pypi.python.org/pypi/nipy
>>>
>>> Thanks to everyone who contributed to this release:
>>>
>>> Alexis Roche
>>> Bertrand Thirion
>>> Ariel Rokem
>>> Elvis Dohmatob
>>> Jean-Baptiste Poline
>>> Yaroslav Halchenko
>>> Jonathan Taylor
>>> Ben Cipollini
>>> Gael Varoquaux
>>> Fabian Pedregosa
>>> Endolith
>>> Michael Waskom
>>>
>>> And of course - your noble selves for discussion and advice,
>>>
>>> Cheers,
>>>
>>> Matthew
>>> _______________________________________________
>>> Neuroimaging mailing list
>>> Neuroimaging at python.org
>>> https://mail.python.org/mailman/listinfo/neuroimaging
>>>
>>
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>
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