[Matplotlib-devel] build fails on MacOsX 10.15.3
Ryan May
rmay31 at gmail.com
Mon Apr 6 18:16:43 EDT 2020
Hi,
Try this:
MACOSX_DEPLOYMENT_TARGET=10.9 python -mpip install .
Ryan
On Mon, Apr 6, 2020 at 4:01 PM Thomas Caswell <tcaswell at gmail.com> wrote:
> Lars,
>
> It looks like you are missing some of the standard c++ headers. How did
> you install your compiler?
>
> Tom
>
> On Sun, Apr 5, 2020 at 2:33 PM Lars Prehn <lprehn at mpi-inf.mpg.de> wrote:
>
>> Hi everyone,
>>
>> I'd like to build matplotlib from the gitlab source. I'm stuck at the
>> point where I need to run:
>>
>> python -mpip install .
>>
>> the output looks as follows (shortened a bit):
>>
>>
>> (matplotlib_dev) Tests-MacBook-Pro-2:matplotlib tadmin$ python -mpip
>> install .
>> Processing /Users/tadmin/projects_2020/matplotlib
>> Requirement already satisfied: cycler>=0.10 in
>> /Users/tadmin/matplotlib_dev/lib/python3.7/site-packages (from
>> matplotlib==3.2.1+1866.gd1f07d344.dirty) (0.10.0)
>> Requirement already satisfied: kiwisolver>=1.0.1 in
>> /Users/tadmin/matplotlib_dev/lib/python3.7/site-packages (from
>> matplotlib==3.2.1+1866.gd1f07d344.dirty) (1.2.0)
>> Requirement already satisfied: numpy>=1.15 in
>> /Users/tadmin/matplotlib_dev/lib/python3.7/site-packages (from
>> matplotlib==3.2.1+1866.gd1f07d344.dirty) (1.18.2)
>> Requirement already satisfied: pillow>=6.2.0 in
>> /Users/tadmin/matplotlib_dev/lib/python3.7/site-packages (from
>> matplotlib==3.2.1+1866.gd1f07d344.dirty) (7.1.1)
>> Requirement already satisfied: pyparsing!=2.0.4,!=2.1.2,!=2.1.6,>=2.0.3
>> in /Users/tadmin/matplotlib_dev/lib/python3.7/site-packages (from
>> matplotlib==3.2.1+1866.gd1f07d344.dirty) (2.4.6)
>> Requirement already satisfied: python-dateutil>=2.1 in
>> /Users/tadmin/matplotlib_dev/lib/python3.7/site-packages (from
>> matplotlib==3.2.1+1866.gd1f07d344.dirty) (2.8.1)
>> Requirement already satisfied: six in
>> /Users/tadmin/matplotlib_dev/lib/python3.7/site-packages (from
>> cycler>=0.10->matplotlib==3.2.1+1866.gd1f07d344.dirty) (1.14.0)
>> Installing collected packages: matplotlib
>> Running setup.py install for matplotlib ... error
>> ERROR: Command errored out with exit status 1:
>> command: /Users/tadmin/matplotlib_dev/bin/python -u -c 'import
>> sys, setuptools, tokenize; sys.argv[0] =
>> '"'"'/private/var/folders/km/pk_8hct1101_18g4znr_wdm00000gq/T/pip-req-build-x2e7fmv6/setup.py'"'"';
>>
>> __file__='"'"'/private/var/folders/km/pk_8hct1101_18g4znr_wdm00000gq/T/pip-req-build-x2e7fmv6/setup.py'"'"';f=getattr(tokenize,
>>
>> '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"',
>> '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))'
>> install --record
>> /private/var/folders/km/pk_8hct1101_18g4znr_wdm00000gq/T/pip-record-qxw7pttp/install-record.txt
>>
>> --single-version-externally-managed --compile --install-headers
>> /Users/tadmin/matplotlib_dev/include/site/python3.7/matplotlib
>> cwd:
>>
>> /private/var/folders/km/pk_8hct1101_18g4znr_wdm00000gq/T/pip-req-build-x2e7fmv6/
>> Complete output (569 lines):
>>
>> Edit setup.cfg to change the build options; suppress output with
>> --quiet.
>>
>> BUILDING MATPLOTLIB
>> matplotlib: yes [3.2.1+1866.gd1f07d344.dirty]
>> python: yes [3.7.1 (default, Dec 14 2018, 13:28:58) [Clang
>> 4.0.1
>> (tags/RELEASE_401/final)]]
>> platform: yes [darwin]
>> sample_data: yes [installing]
>> tests: no [skipping due to configuration]
>> macosx: yes [installing]
>>
>> /Users/tadmin/anaconda3/lib/python3.7/distutils/dist.py:274:
>> UserWarning: Unknown distribution option: 'long_description_content_type'
>> warnings.warn(msg)
>> running install
>> running build
>> running build_py
>> creating build/lib.macosx-10.7-x86_64-3.7
>> copying lib/pylab.py -> build/lib.macosx-10.7-x86_64-3.7
>> creating build/lib.macosx-10.7-x86_64-3.7/mpl_toolkits
>> copying lib/mpl_toolkits/__init__.py ->
>> build/lib.macosx-10.7-x86_64-3.7/mpl_toolkits
>> creating build/lib.macosx-10.7-x86_64-3.7/matplotlib
>> copying lib/matplotlib/hatch.py ->
>> build/lib.macosx-10.7-x86_64-3.7/matplotlib
>>
>> .....
>>
>> copying lib/matplotlib/mpl-data/stylelib/seaborn-deep.mplstyle ->
>> build/lib.macosx-10.7-x86_64-3.7/matplotlib/mpl-data/stylelib
>> copying lib/matplotlib/mpl-data/images/back.pdf ->
>> build/lib.macosx-10.7-x86_64-3.7/matplotlib/mpl-data/images
>> UPDATING build/lib.macosx-10.7-x86_64-3.7/matplotlib/_version.py
>> set build/lib.macosx-10.7-x86_64-3.7/matplotlib/_version.py to
>> '3.2.1+1866.gd1f07d344.dirty'
>> running build_ext
>> building 'matplotlib.backends._backend_agg' extension
>> /usr/bin/gcc -Wno-unused-result -Wsign-compare -Wunreachable-code
>> -DNDEBUG -g -fwrapv -O3 -Wall -I/Users/tadmin/anaconda3/include -arch
>> x86_64 -I/Users/tadmin/anaconda3/include -arch x86_64
>> -DPY_ARRAY_UNIQUE_SYMBOL=MPL_matplotlib_backends__backend_agg_ARRAY_API
>> -DNPY_NO_DEPRECATED_API=NPY_1_7_API_VERSION -D__STDC_FORMAT_MACROS=1
>> -DFREETYPE_BUILD_TYPE=local -Ibuild/freetype-2.6.1/include
>> -Iextern/agg24-svn/include
>> -I/Users/tadmin/matplotlib_dev/lib/python3.7/site-packages/numpy/core/include
>>
>> -I/Users/tadmin/matplotlib_dev/include
>> -I/Users/tadmin/anaconda3/include/python3.7m -c src/checkdep_freetype2.c
>> -o build/temp.macosx-10.7-x86_64-3.7/src/checkdep_freetype2.o
>> src/checkdep_freetype2.c:14:9: warning: Compiling with FreeType
>> version 2.6.1. [-W#pragma-messages]
>> #pragma message("Compiling with FreeType version " \
>> ^
>> 1 warning generated.
>> /usr/bin/gcc -Wno-unused-result -Wsign-compare -Wunreachable-code
>> -DNDEBUG -g -fwrapv -O3 -Wall -I/Users/tadmin/anaconda3/include -arch
>> x86_64 -I/Users/tadmin/anaconda3/include -arch x86_64
>> -DPY_ARRAY_UNIQUE_SYMBOL=MPL_matplotlib_backends__backend_agg_ARRAY_API
>> -DNPY_NO_DEPRECATED_API=NPY_1_7_API_VERSION -D__STDC_FORMAT_MACROS=1
>> -DFREETYPE_BUILD_TYPE=local -Ibuild/freetype-2.6.1/include
>> -Iextern/agg24-svn/include
>> -I/Users/tadmin/matplotlib_dev/lib/python3.7/site-packages/numpy/core/include
>>
>> -I/Users/tadmin/matplotlib_dev/include
>> -I/Users/tadmin/anaconda3/include/python3.7m -c src/mplutils.cpp -o
>> build/temp.macosx-10.7-x86_64-3.7/src/mplutils.o
>> warning: include path for stdlibc++ headers not found; pass
>> '-std=libc++' on the command line to use the libc++ standard library
>> instead [-Wstdlibcxx-not-found]
>> 1 warning generated.
>> /usr/bin/gcc -Wno-unused-result -Wsign-compare -Wunreachable-code
>> -DNDEBUG -g -fwrapv -O3 -Wall -I/Users/tadmin/anaconda3/include -arch
>> x86_64 -I/Users/tadmin/anaconda3/include -arch x86_64
>> -DPY_ARRAY_UNIQUE_SYMBOL=MPL_matplotlib_backends__backend_agg_ARRAY_API
>> -DNPY_NO_DEPRECATED_API=NPY_1_7_API_VERSION -D__STDC_FORMAT_MACROS=1
>> -DFREETYPE_BUILD_TYPE=local -Ibuild/freetype-2.6.1/include
>> -Iextern/agg24-svn/include
>> -I/Users/tadmin/matplotlib_dev/lib/python3.7/site-packages/numpy/core/include
>>
>> -I/Users/tadmin/matplotlib_dev/include
>> -I/Users/tadmin/anaconda3/include/python3.7m -c src/py_converters.cpp -o
>> build/temp.macosx-10.7-x86_64-3.7/src/py_converters.o
>> warning: include path for stdlibc++ headers not found; pass
>> '-std=libc++' on the command line to use the libc++ standard library
>> instead [-Wstdlibcxx-not-found]
>> In file included from src/py_converters.cpp:3:
>> In file included from src/py_converters.h:17:
>> src/_backend_agg_basic_types.h:7:10: fatal error: 'vector' file not
>> found
>> #include <vector>
>> ^~~~~~~~
>> 1 warning and 1 error generated.
>> error: command '/usr/bin/gcc' failed with exit status 1
>> ----------------------------------------
>> ERROR: Command errored out with exit status 1:
>> /Users/tadmin/matplotlib_dev/bin/python -u -c 'import sys, setuptools,
>> tokenize; sys.argv[0] =
>> '"'"'/private/var/folders/km/pk_8hct1101_18g4znr_wdm00000gq/T/pip-req-build-x2e7fmv6/setup.py'"'"';
>>
>> __file__='"'"'/private/var/folders/km/pk_8hct1101_18g4znr_wdm00000gq/T/pip-req-build-x2e7fmv6/setup.py'"'"';f=getattr(tokenize,
>>
>> '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"',
>> '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))'
>> install --record
>> /private/var/folders/km/pk_8hct1101_18g4znr_wdm00000gq/T/pip-record-qxw7pttp/install-record.txt
>>
>> --single-version-externally-managed --compile --install-headers
>> /Users/tadmin/matplotlib_dev/include/site/python3.7/matplotlib Check the
>> logs for full command output.
>>
>>
>>
>> How can I approach to solve this?
>>
>> Best regards,
>>
>> Lars
>>
>> _______________________________________________
>> Matplotlib-devel mailing list
>> Matplotlib-devel at python.org
>> https://mail.python.org/mailman/listinfo/matplotlib-devel
>>
>
>
> --
> Thomas Caswell
> tcaswell at gmail.com
> _______________________________________________
> Matplotlib-devel mailing list
> Matplotlib-devel at python.org
> https://mail.python.org/mailman/listinfo/matplotlib-devel
>
--
Ryan May
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