[SciPy-User] Problem building scipy-0.13.0b1 with umfpack

Sergio Rojas sergio_r at mail.com
Thu Oct 3 15:46:25 EDT 2013


Hello,

Trying to build scipy-0.13.0b1, the command
 python setup.py build config_fc --fcompiler=gnu95
ends with errors about umfpack [1]. This is strange because
the lines related to that library in my site.cfg file are commented

#
#[umfpack]
#search_static_first = true
#umfpack_libs = umfpack
#

Nevertheless, something (which I have been unable to find) is telling 'setup.py build` to search for that
library (which is actually installed in the same directory where I have installed atlas, lapack, blas, etc.

Is there a way to disable in setup.py to search for umfpack?

Regards,

Sergio
[1]

/home/myProg/NumLibs64b/lib/libumfpack.a: could not read symbols: Bad value
collect2: ld returned 1 exit status
error: Command "gcc -pthread -shared build/temp.linux-x86_64-2.7/build/src.linux-x86_64-2.7/scipy/sparse/linalg/dsolve/umfpack/_umfpack_wrap.o -L/home/myProg/NumLibs64b/lib -Lbuild/temp.linux-x86_64-2.7 -lumfpack -lamd -lptf77blas -lptcblas -latlas -o build/lib.linux-x86_64-2.7/scipy/sparse/linalg/dsolve/umfpack/__umfpack.so" failed with exit status 1
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