[SciPy-user] scipy compilation succeeds, test fails

Sat Apr 21 07:04:01 EDT 2007

Robert,

I've installed cctools as you told me, but unfortunately it still does
not work for the same reason (you can find the log as attachment).
Any idea?

Michele

On 4/21/07, Robert Kern <robert.kern at gmail.com> wrote:
> Michele Mazzucco wrote:
> > Hi all,
> >
> > I've just built SciPy on an Intel Mac OS 10.4, python 2.5.1, gcc
> > 4.0.1, gfortran 4.3.0 and fftw 3.1.2.
> > I've followed the instructions described here [1]. I can successfully
> > install the library, howevever the call to
> > scipy.test(1,10)
> > fails:
> >
> > ======================================================================
> > ERROR: check_integer (scipy.io.tests.test_array_import.test_read_array)
> > ----------------------------------------------------------------------
> > Traceback (most recent call last):
> >   File "/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/scipy/io/tests/test_array_import.py",
> > line 55, in check_integer
> >     from scipy import stats
> >   File "/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/scipy/stats/__init__.py",
> > line 7, in <module>
> >     from stats import *
> >   File "/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/scipy/stats/stats.py",
> > line 190, in <module>
> >     import scipy.special as special
> >   File "/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/scipy/special/__init__.py",
> > line 8, in <module>
> >     from basic import *
> >   File "/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/scipy/special/basic.py",
> > line 8, in <module>
> >     from _cephes import *
> > ImportError: dlopen(/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/scipy/special/_cephes.so,
> > 2): Symbol not found: ___dso_handle
> >   Referenced from:
> > /Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/scipy/special/_cephes.so
> >   Expected in: dynamic lookup
>
> Install cctools:
>
>   ftp://gcc.gnu.org/pub/gcc/infrastructure/cctools-590.36.dmg
>
> I'm afraid I don't know much of the how or why, but it should fix this
> particular error.
>
> --
> Robert Kern
>
> "I have come to believe that the whole world is an enigma, a harmless enigma
>  that is made terrible by our own mad attempt to interpret it as though it had
>  an underlying truth."
>   -- Umberto Eco
> _______________________________________________
> SciPy-user mailing list
> SciPy-user at scipy.org
> http://projects.scipy.org/mailman/listinfo/scipy-user
>
-------------- next part --------------
Python 2.5.1 (r251:54869, Apr 18 2007, 22:08:04) 
[GCC 4.0.1 (Apple Computer, Inc. build 5367)] on darwin
Type "help", "copyright", "credits" or "license" for more information.
>>> import scipy
/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/testing/numpytest.py:634: DeprecationWarning: ScipyTest is now called NumpyTest; please update your code
  DeprecationWarning)
>>> scipy.test(1,10)
/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/testing/numpytest.py:198: DeprecationWarning: ScipyTestCase is now called NumpyTestCase; please update your code
  DeprecationWarning)
  Found 4 tests for scipy.io.array_import
Warning: No test file found in /Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/scipy/optimize/tests for module <module 'scipy.optimize.info' from '...ckages/scipy/optimize/info.pyc'>
Warning: No test file found in /Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/scipy/ndimage/tests for module <module 'scipy.ndimage.fourier' from '...ages/scipy/ndimage/fourier.pyc'>
  Found 397 tests for scipy.ndimage
Warning: No test file found in /Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/scipy/lib/lapack/tests for module <module 'scipy.lib.lapack.info' from '...ages/scipy/lib/lapack/info.pyc'>
Warning: No test file found in /Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/scipy/linsolve/umfpack/tests for module <module 'scipy.linsolve.umfpack.info' from '...cipy/linsolve/umfpack/info.pyc'>
Warning: No test file found in /Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/scipy/stats/tests for module <module 'scipy.stats.info' from '...-packages/scipy/stats/info.pyc'>
Warning: No test file found in /Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/scipy/maxentropy/tests for module <module 'scipy.maxentropy.info' from '...ages/scipy/maxentropy/info.pyc'>
Warning: No test file found in /Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/scipy/misc/tests for module <module 'scipy.misc' from '...ckages/scipy/misc/__init__.pyc'>
Warning: No test file found in /Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/scipy/lib/tests for module <module 'scipy.lib.info' from '...te-packages/scipy/lib/info.pyc'>
Warning: No test file found in /Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/scipy/tests for module <module 'scipy.__config__' from '...-packages/scipy/__config__.pyc'>
Warning: No test file found in /Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/scipy/linalg/tests for module <module 'scipy.linalg.info' from '...packages/scipy/linalg/info.pyc'>
  Found 12 tests for scipy.io.mmio
Warning: No test file found in /Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/scipy/signal/tests for module <module 'scipy.signal.waveforms' from '...ges/scipy/signal/waveforms.pyc'>
Warning: No test file found in /Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/scipy/tests for module <module 'scipy' from '...te-packages/scipy/__init__.pyc'>
  Found 4 tests for scipy.io.recaster
Warning: No test file found in /Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/scipy/ndimage/tests for module <module 'scipy.ndimage._nd_image' from '...ges/scipy/ndimage/_nd_image.so'>
Warning: No test file found in /Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/scipy/io/tests for module <module 'scipy.io.numpyio' from '...e-packages/scipy/io/numpyio.so'>
Warning: No test file found in /Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/scipy/io/tests for module <module 'scipy.io.data_store' from '...ckages/scipy/io/data_store.pyc'>
Warning: No test file found in /Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/scipy/misc/tests for module <module 'scipy.misc.limits' from '...packages/scipy/misc/limits.pyc'>
Warning: FAILURE importing tests for <module 'scipy.io.mio' from '...site-packages/scipy/io/mio.pyc'>
/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/scipy/sparse/sparse.py:12: ImportError: dlopen(/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/scipy/sparse/sparsetools.so, 2): Symbol not found: ___dso_handle
  Referenced from: /Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/scipy/sparse/sparsetools.so
  Expected in: dynamic lookup
 (in <module>)
Warning: No test file found in /Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/scipy/signal/tests for module <module 'scipy.signal.sigtools' from '...kages/scipy/signal/sigtools.so'>
Warning: No test file found in /Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/scipy/fftpack/tests for module <module 'scipy.fftpack.fftpack_version' from '...py/fftpack/fftpack_version.pyc'>
Warning: No test file found in /Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/scipy/sparse/tests for module <module 'scipy.sparse.info' from '...packages/scipy/sparse/info.pyc'>
Warning: No test file found in /Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/scipy/ndimage/tests for module <module 'scipy.ndimage.info' from '...ackages/scipy/ndimage/info.pyc'>
Warning: No test file found in /Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/scipy/ndimage/tests for module <module 'scipy.ndimage.measurements' from '...scipy/ndimage/measurements.pyc'>
Warning: No test file found in /Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/scipy/linalg/tests for module <module 'scipy.linalg.linalg_version' from '...cipy/linalg/linalg_version.pyc'>
Warning: No test file found in /Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/scipy/cluster/tests for module <module 'scipy.cluster.info' from '...ackages/scipy/cluster/info.pyc'>
Warning: No test file found in /Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/scipy/io/tests for module <module 'scipy.io.info' from '...ite-packages/scipy/io/info.pyc'>
Warning: No test file found in /Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/scipy/interpolate/tests for module <module 'scipy.interpolate.info' from '...ges/scipy/interpolate/info.pyc'>
Warning: No test file found in /Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/scipy/io/tests for module <module 'scipy.io.miobase' from '...-packages/scipy/io/miobase.pyc'>
Warning: No test file found in /Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/scipy/integrate/tests for module <module 'scipy.integrate.info' from '...kages/scipy/integrate/info.pyc'>
Warning: No test file found in /Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/scipy/io/tests for module <module 'scipy.io.pickler' from '...-packages/scipy/io/pickler.pyc'>
Warning: No test file found in /Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/scipy/special/tests for module <module 'scipy.special.info' from '...ackages/scipy/special/info.pyc'>
Warning: No test file found in /Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/scipy/ndimage/tests for module <module 'scipy.ndimage._ni_support' from '.../scipy/ndimage/_ni_support.pyc'>
Warning: No test file found in /Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/scipy/lib/blas/tests for module <module 'scipy.lib.blas.info' from '...ckages/scipy/lib/blas/info.pyc'>
Warning: No test file found in /Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/scipy/lib/tests for module <module 'scipy.lib' from '...ackages/scipy/lib/__init__.pyc'>
Warning: No test file found in /Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/scipy/ndimage/tests for module <module 'scipy.ndimage.interpolation' from '...cipy/ndimage/interpolation.pyc'>
Warning: No test file found in /Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/scipy/io/tests for module <module 'scipy.io.dumb_shelve' from '...kages/scipy/io/dumb_shelve.pyc'>
Warning: No test file found in /Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/scipy/fftpack/tests for module <module 'scipy.fftpack.info' from '...ackages/scipy/fftpack/info.pyc'>
Warning: No test file found in /Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/scipy/io/tests for module <module 'scipy.io' from '...packages/scipy/io/__init__.pyc'>
Warning: No test file found in /Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/scipy/linalg/tests for module <module 'scipy.linalg.flinalg' from '...kages/scipy/linalg/flinalg.pyc'>
Warning: No test file found in /Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/scipy/weave/tests for module <module 'scipy.weave.info' from '...-packages/scipy/weave/info.pyc'>
Warning: No test file found in /Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/scipy/misc/tests for module <module 'scipy.misc.common' from '...packages/scipy/misc/common.pyc'>
Warning: No test file found in /Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/scipy/tests for module <module 'scipy.version' from '...ite-packages/scipy/version.pyc'>
Warning: No test file found in /Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/scipy/ndimage/tests for module <module 'scipy.ndimage.filters' from '...ages/scipy/ndimage/filters.pyc'>
Warning: No test file found in /Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/scipy/misc/tests for module <module 'scipy.misc.info' from '...e-packages/scipy/misc/info.pyc'>
Warning: No test file found in /Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/scipy/ndimage/tests for module <module 'scipy.ndimage.morphology' from '...s/scipy/ndimage/morphology.pyc'>
Warning: No test file found in /Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/scipy/signal/tests for module <module 'scipy.signal.info' from '...packages/scipy/signal/info.pyc'>
Warning: No test file found in /Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/scipy/io/tests for module <module 'scipy.io.mio4' from '...ite-packages/scipy/io/mio4.pyc'>
Warning: No test file found in /Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/scipy/io/tests for module <module 'scipy.io.mio5' from '...ite-packages/scipy/io/mio5.pyc'>
Warning: No test file found in /Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/scipy/linsolve/tests for module <module 'scipy.linsolve.info' from '...ckages/scipy/linsolve/info.pyc'>
  Found 0 tests for __main__
check_basic (scipy.io.tests.test_array_import.test_numpyio)
Don't worry about a warning regarding the number of bytes read.
Warning: 1000000 bytes requested, 20 bytes read.
 ... ok
check_complex (scipy.io.tests.test_array_import.test_read_array) ... ok
check_float (scipy.io.tests.test_array_import.test_read_array) ... ok
check_integer (scipy.io.tests.test_array_import.test_read_array) ... ERROR
affine_transform 1 ... ok
affine transform 2 ... ok
affine transform 3 ... ok
affine transform 4 ... ok
affine transform 5 ... ok
affine transform 6 ... ok
affine transform 7 ... ok
affine transform 8 ... ok
affine transform 9 ... ok
affine transform 10 ... ok
affine transform 11 ... ok
affine transform 12 ... ok
affine transform 13 ... ok
affine transform 14 ... ok
affine transform 15 ... ok
affine transform 16 ... ok
affine transform 17 ... ok
affine transform 18 ... ok
affine transform 19 ... ok
affine transform 20 ... ok
affine transform 21 ... ok
binary closing 1 ... ok
binary closing 2 ... ok
binary dilation 1 ... ok
binary dilation 2 ... ok
binary dilation 3 ... ok
binary dilation 4 ... ok
binary dilation 5 ... ok
binary dilation 6 ... ok
binary dilation 7 ... ok
binary dilation 8 ... ok
binary dilation 9 ... ok
binary dilation 10 ... ok
binary dilation 11 ... ok
binary dilation 12 ... ok
binary dilation 13 ... ok
binary dilation 14 ... ok
binary dilation 15 ... ok
binary dilation 16 ... ok
binary dilation 17 ... ok
binary dilation 18 ... ok
binary dilation 19 ... ok
binary dilation 20 ... ok
binary dilation 21 ... ok
binary dilation 22 ... ok
binary dilation 23 ... ok
binary dilation 24 ... ok
binary dilation 25 ... ok
binary dilation 26 ... ok
binary dilation 27 ... ok
binary dilation 28 ... ok
binary dilation 29 ... ok
binary dilation 30 ... ok
binary dilation 31 ... ok
binary dilation 32 ... ok
binary dilation 33 ... ok
binary dilation 34 ... ok
binary dilation 35 ... ok
binary erosion 1 ... ok
binary erosion 2 ... ok
binary erosion 3 ... ok
binary erosion 4 ... ok
binary erosion 5 ... ok
binary erosion 6 ... ok
binary erosion 7 ... ok
binary erosion 8 ... ok
binary erosion 9 ... ok
binary erosion 10 ... ok
binary erosion 11 ... ok
binary erosion 12 ... ok
binary erosion 13 ... ok
binary erosion 14 ... ok
binary erosion 15 ... ok
binary erosion 16 ... ok
binary erosion 17 ... ok
binary erosion 18 ... ok
binary erosion 19 ... ok
binary erosion 20 ... ok
binary erosion 21 ... ok
binary erosion 22 ... ok
binary erosion 23 ... ok
binary erosion 24 ... ok
binary erosion 25 ... ok
binary erosion 26 ... ok
binary erosion 27 ... ok
binary erosion 28 ... ok
binary erosion 29 ... ok
binary erosion 30 ... ok
binary erosion 31 ... ok
binary erosion 32 ... ok
binary erosion 33 ... ok
binary erosion 34 ... ok
binary erosion 35 ... ok
binary erosion 36 ... ok
binary fill holes 1 ... ok
binary fill holes 2 ... ok
binary fill holes 3 ... ok
binary opening 1 ... ok
binary opening 2 ... ok
binary propagation 1 ... ok
binary propagation 2 ... ok
black tophat 1 ... ok
black tophat 2 ... ok
center of mass 1 ... ok
center of mass 2 ... ok
center of mass 3 ... ok
center of mass 4 ... ok
center of mass 5 ... ok
center of mass 6 ... ok
center of mass 7 ... ok
center of mass 8 ... ok
center of mass 9 ... ok
correlation 1 ... ok
correlation 2 ... ok
correlation 3 ... ok
correlation 4 ... ok
correlation 5 ... ok
correlation 6 ... ok
correlation 7 ... ok
correlation 8 ... ok
correlation 9 ... ok
correlation 10 ... ok
correlation 11 ... ok
correlation 12 ... ok
correlation 13 ... ok
correlation 14 ... ok
correlation 15 ... ok
correlation 16 ... ok
correlation 17 ... ok
correlation 18 ... ok
correlation 19 ... ok
correlation 20 ... ok
correlation 21 ... ok
correlation 22 ... ok
correlation 23 ... ok
correlation 24 ... ok
correlation 25 ... ok
brute force distance transform 1 ... ok
brute force distance transform 2 ... ok
brute force distance transform 3 ... ok
brute force distance transform 4 ... ok
brute force distance transform 5 ... ok
brute force distance transform 6 ... ok
chamfer type distance transform 1 ... ok
chamfer type distance transform 2 ... ok
chamfer type distance transform 3 ... ok
euclidean distance transform 1 ... ok
euclidean distance transform 2 ... ok
euclidean distance transform 3 ... ok
euclidean distance transform 4 ... ok
line extension 1 ... ok
line extension 2 ... ok
line extension 3 ... ok
line extension 4 ... ok
line extension 5 ... ok
line extension 6 ... ok
line extension 7 ... ok
line extension 8 ... ok
line extension 9 ... ok
line extension 10 ... ok
extrema 1 ... ok
extrema 2 ... ok
extrema 3 ... ok
extrema 4 ... ok
find_objects 1 ... ok
find_objects 2 ... ok
find_objects 3 ... ok
find_objects 4 ... ok
find_objects 5 ... ok
find_objects 6 ... ok
find_objects 7 ... ok
find_objects 8 ... ok
find_objects 9 ... ok
ellipsoid fourier filter for complex transforms 1 ... ok
ellipsoid fourier filter for real transforms 1 ... ok
gaussian fourier filter for complex transforms 1 ... ok
gaussian fourier filter for real transforms 1 ... ok
shift filter for complex transforms 1 ... ok
shift filter for real transforms 1 ... ok
uniform fourier filter for complex transforms 1 ... ok
uniform fourier filter for real transforms 1 ... ok
gaussian filter 1 ... ok
gaussian filter 2 ... ok
gaussian filter 3 ... ok
gaussian filter 4 ... ok
gaussian filter 5 ... ok
gaussian filter 6 ... ok
gaussian gradient magnitude filter 1 ... ok
gaussian gradient magnitude filter 2 ... ok
gaussian laplace filter 1 ... ok
gaussian laplace filter 2 ... ok
generation of a binary structure 1 ... ok
generation of a binary structure 2 ... ok
generation of a binary structure 3 ... ok
generation of a binary structure 4 ... ok
generic filter 1 ... ok
generic 1d filter 1 ... ok
generic gradient magnitude 1 ... ok
generic laplace filter 1 ... ok
geometric transform 1 ... ok
geometric transform 2 ... ok
geometric transform 3 ... ok
geometric transform 4 ... ok
geometric transform 5 ... ok
geometric transform 6 ... ok
geometric transform 7 ... ok
geometric transform 8 ... ok
geometric transform 10 ... ok
geometric transform 13 ... ok
geometric transform 14 ... ok
geometric transform 15 ... ok
geometric transform 16 ... ok
geometric transform 17 ... ok
geometric transform 18 ... ok
geometric transform 19 ... ok
geometric transform 20 ... ok
geometric transform 21 ... ok
geometric transform 22 ... ok
geometric transform 23 ... ok
geometric transform 24 ... ok
grey closing 1 ... ok
grey closing 2 ... ok
grey dilation 1 ... ok
grey dilation 2 ... ok
grey dilation 3 ... ok
grey erosion 1 ... ok
grey erosion 2 ... ok
grey erosion 3 ... ok
grey opening 1 ... ok
grey opening 2 ... ok
histogram 1 ... ok
histogram 2 ... ok
histogram 3 ... ok
binary hit-or-miss transform 1 ... ok
binary hit-or-miss transform 2 ... ok
binary hit-or-miss transform 3 ... ok
iterating a structure 1 ... ok
iterating a structure 2 ... ok
iterating a structure 3 ... ok
label 1 ... ok
label 2 ... ok
label 3 ... ok
label 4 ... ok
label 5 ... ok
label 6 ... ok
label 7 ... ok
label 8 ... ok
label 9 ... ok
label 10 ... ok
label 11 ... ok
label 12 ... ok
label 13 ... ok
laplace filter 1 ... ok
laplace filter 2 ... ok
map coordinates 1 ... ok
map coordinates 2 ... ok
maximum 1 ... ok
maximum 2 ... ok
maximum 3 ... ok
maximum 4 ... ok
maximum filter 1 ... ok
maximum filter 2 ... ok
maximum filter 3 ... ok
maximum filter 4 ... ok
maximum filter 5 ... ok
maximum filter 6 ... ok
maximum filter 7 ... ok
maximum filter 8 ... ok
maximum filter 9 ... ok
maximum position 1 ... ok
maximum position 2 ... ok
maximum position 3 ... ok
maximum position 4 ... ok
maximum position 5 ... ok
maximum position 6 ... ok
mean 1 ... ok
mean 2 ... ok
mean 3 ... ok
mean 4 ... ok
minimum 1 ... ok
minimum 2 ... ok
minimum 3 ... ok
minimum 4 ... ok
minimum filter 1 ... ok
minimum filter 2 ... ok
minimum filter 3 ... ok
minimum filter 4 ... ok
minimum filter 5 ... ok
minimum filter 6 ... ok
minimum filter 7 ... ok
minimum filter 8 ... ok
minimum filter 9 ... ok
minimum position 1 ... ok
minimum position 2 ... ok
minimum position 3 ... ok
minimum position 4 ... ok
minimum position 5 ... ok
minimum position 6 ... ok
minimum position 7 ... ok
morphological gradient 1 ... ok
morphological gradient 2 ... ok
morphological laplace 1 ... ok
morphological laplace 2 ... ok
prewitt filter 1 ... ok
prewitt filter 2 ... ok
prewitt filter 3 ... ok
prewitt filter 4 ... ok
rank filter 1 ... ok
rank filter 2 ... ok
rank filter 3 ... ok
rank filter 4 ... ok
rank filter 5 ... ok
rank filter 6 ... ok
rank filter 7 ... ok
median filter 8 ... ok
rank filter 9 ... ok
rank filter 10 ... ok
rank filter 11 ... ok
rank filter 12 ... ok
rank filter 13 ... ok
rank filter 14 ... ok
rotate 1 ... ok
rotate 2 ... ok
rotate 3 ... ok
rotate 4 ... ok
rotate 5 ... ok
rotate 6 ... ok
rotate 7 ... ok
rotate 8 ... ok
shift 1 ... ok
shift 2 ... ok
shift 3 ... ok
shift 4 ... ok
shift 5 ... ok
shift 6 ... ok
shift 7 ... ok
shift 8 ... ok
shift 9 ... ok
sobel filter 1 ... ok
sobel filter 2 ... ok
sobel filter 3 ... ok
sobel filter 4 ... ok
spline filter 1 ... ok
spline filter 2 ... ok
spline filter 3 ... ok
spline filter 4 ... ok
spline filter 5 ... ok
standard deviation 1 ... ok
standard deviation 2 ... ok
standard deviation 3 ... ok
standard deviation 4 ... ok
standard deviation 5 ... ok
standard deviation 6 ... ok
sum 1 ... ok
sum 2 ... ok
sum 3 ... ok
sum 4 ... ok
sum 5 ... ok
sum 6 ... ok
sum 7 ... ok
sum 8 ... ok
sum 9 ... ok
sum 10 ... ok
sum 11 ... ok
sum 12 ... ok
uniform filter 1 ... ok
uniform filter 2 ... ok
uniform filter 3 ... ok
uniform filter 4 ... ok
uniform filter 5 ... ok
uniform filter 6 ... ok
variance 1 ... ok
variance 2 ... ok
variance 3 ... ok
variance 4 ... ok
variance 5 ... ok
variance 6 ... ok
watershed_ift 1 ... ok
watershed_ift 2 ... ok
watershed_ift 3 ... ok
watershed_ift 4 ... ok
watershed_ift 5 ... ok
watershed_ift 6 ... ok
watershed_ift 7 ... ok
white tophat 1 ... ok
white tophat 2 ... ok
zoom 1 ... ok
zoom 2 ... ok
zoom 3 ... ok
zoom 4 ... ok
zoom 5 ... ok
zoom 6 ... ok
zoom 7 ... ok
zoom 8 ... ok
zoom 9 ... ok
zoom 10 ... ok
zoom by affine transformation 1 ... ok
check_random_rect_real (scipy.io.tests.test_mmio.test_mmio_array) ... ok
check_random_symmetric_real (scipy.io.tests.test_mmio.test_mmio_array) ... ok
check_simple (scipy.io.tests.test_mmio.test_mmio_array) ... ok
check_simple_complex (scipy.io.tests.test_mmio.test_mmio_array) ... ok
check_simple_hermitian (scipy.io.tests.test_mmio.test_mmio_array) ... ok
check_simple_real (scipy.io.tests.test_mmio.test_mmio_array) ... ok
check_simple_rectangular (scipy.io.tests.test_mmio.test_mmio_array) ... ok
check_simple_rectangular_real (scipy.io.tests.test_mmio.test_mmio_array) ... ok
check_simple_skew_symmetric (scipy.io.tests.test_mmio.test_mmio_array) ... ok
check_simple_skew_symmetric_float (scipy.io.tests.test_mmio.test_mmio_array) ... ok
check_simple_symmetric (scipy.io.tests.test_mmio.test_mmio_array) ... ok
check_simple_todense (scipy.io.tests.test_mmio.test_mmio_coordinate) ... ERROR
test_downcasts (scipy.io.tests.test_recaster.test_recaster) ... ok
test_init (scipy.io.tests.test_recaster.test_recaster) ... ok
test_smallest_int_sctype (scipy.io.tests.test_recaster.test_recaster) ... ok
test_smallest_same_kind (scipy.io.tests.test_recaster.test_recaster) ... ok

======================================================================
ERROR: check_integer (scipy.io.tests.test_array_import.test_read_array)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/scipy/io/tests/test_array_import.py", line 55, in check_integer
    from scipy import stats
  File "/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/scipy/stats/__init__.py", line 7, in <module>
    from stats import *
  File "/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/scipy/stats/stats.py", line 190, in <module>
    import scipy.special as special
  File "/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/scipy/special/__init__.py", line 8, in <module>
    from basic import *
  File "/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/scipy/special/basic.py", line 8, in <module>
    from _cephes import *
ImportError: dlopen(/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/scipy/special/_cephes.so, 2): Symbol not found: ___dso_handle
  Referenced from: /Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/scipy/special/_cephes.so
  Expected in: dynamic lookup

======================================================================
ERROR: check_simple_todense (scipy.io.tests.test_mmio.test_mmio_coordinate)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/scipy/io/tests/test_mmio.py", line 151, in check_simple_todense
    b = mmread(fn).todense()
AttributeError: 'numpy.ndarray' object has no attribute 'todense'

----------------------------------------------------------------------
Ran 417 tests in 2.013s

FAILED (errors=2)
<unittest.TextTestRunner object at 0x17e0d90>
>>>