[SciPy-dev] core dump during weave tests on Solaris
Skip Montanaro
skip at pobox.com
Fri Sep 20 09:04:53 EDT 2002
I'm now getting a Python core dump on Solaris if I run scipy.test(5).
Running scipy.test(1) succeeds though still with a failure in test_shapiro.
Here's the output of scipy.weave.test():
creating test suite for: weave.ast_tools
creating test suite for: weave.standard_array_spec
No test suite found for weave.accelerate_tools
No test suite found for weave.base_info
No test suite found for weave.base_spec
No test suite found for weave.blitz_spec
creating test suite for: weave.blitz_tools
creating test suite for: weave.build_tools
No test suite found for weave.bytecodecompiler
creating test suite for: weave.c_spec
creating test suite for: weave.catalog
No test suite found for weave.common_info
No test suite found for weave.converters
No test suite found for weave.dumb_shelve
No test suite found for weave.dumbdbm_patched
creating test suite for: weave.ext_tools
building extensions here: /home/skip/.python21_compiled/146290
building extensions here: /home/skip/.python21_compiled/146291
creating test suite for: weave.inline_tools
creating test suite for: weave.size_check
creating test suite for: weave.slice_handler
No test suite found for weave.vtk_spec
No test suite found for weave.wx_spec
......
Expression: result[1:-1,1:-1] = (b[1:-1,1:-1] + b[2:,1:-1] + b[:-2,1:-1]+ b[1:-1,2:] + b[1:-1,:-2]) / 5.
Run: (10, 10) f
"/home/skip/tmp/sunos5/2.1/lib/python2.1/site-packages/weave/blitz-20001213/blitz/tinyvec.h", line 488: Error: Unable to parse field declaration in class template: skipping field.
"/home/skip/tmp/sunos5/2.1/lib/python2.1/site-packages/weave/blitz-20001213/blitz/array/storage.h", line 279: Where: While specializing "blitz::GeneralArrayStorage<1>".
"/home/skip/tmp/sunos5/2.1/lib/python2.1/site-packages/weave/blitz-20001213/blitz/array/storage.h", line 279: Where: Specialized in non-template code.
"/home/skip/tmp/sunos5/2.1/lib/python2.1/site-packages/weave/blitz-20001213/blitz/array/storage.h", line 237: Error: The type "blitz::TinyVector<int, 1>" is incomplete.
"/home/skip/tmp/sunos5/2.1/lib/python2.1/site-packages/weave/blitz-20001213/blitz/array/storage.h", line 279: Where: While specializing "blitz::GeneralArrayStorage<1>".
"/home/skip/tmp/sunos5/2.1/lib/python2.1/site-packages/weave/blitz-20001213/blitz/array/storage.h", line 279: Where: Specialized in non-template code.
"/home/skip/tmp/sunos5/2.1/lib/python2.1/site-packages/weave/blitz-20001213/blitz/tinyvec.h", line 488: Error: Unable to parse field declaration in class template: skipping field.
"/home/skip/tmp/sunos5/2.1/lib/python2.1/site-packages/weave/blitz-20001213/blitz/array/storage.h", line 279: Where: While specializing "blitz::GeneralArrayStorage<1>".
"/home/skip/tmp/sunos5/2.1/lib/python2.1/site-packages/weave/blitz-20001213/blitz/array/storage.h", line 279: Where: Specialized in non-template code.
"/home/skip/tmp/sunos5/2.1/lib/python2.1/site-packages/weave/blitz-20001213/blitz/array/storage.h", line 238: Error: The type "blitz::TinyVector<bool, 1>" is incomplete.
"/home/skip/tmp/sunos5/2.1/lib/python2.1/site-packages/weave/blitz-20001213/blitz/array/storage.h", line 279: Where: While specializing "blitz::GeneralArrayStorage<1>".
"/home/skip/tmp/sunos5/2.1/lib/python2.1/site-packages/weave/blitz-20001213/blitz/array/storage.h", line 279: Where: Specialized in non-template code.
"/home/skip/tmp/sunos5/2.1/lib/python2.1/site-packages/weave/blitz-20001213/blitz/tinyvec.h", line 488: Error: Unable to parse field declaration in class template: skipping field.
"/home/skip/tmp/sunos5/2.1/lib/python2.1/site-packages/weave/blitz-20001213/blitz/array/storage.h", line 279: Where: While specializing "blitz::GeneralArrayStorage<1>".
"/home/skip/tmp/sunos5/2.1/lib/python2.1/site-packages/weave/blitz-20001213/blitz/array/storage.h", line 279: Where: Specialized in non-template code.
"/home/skip/tmp/sunos5/2.1/lib/python2.1/site-packages/weave/blitz-20001213/blitz/array/storage.h", line 239: Error: The type "blitz::TinyVector<int, 1>" is incomplete.
"/home/skip/tmp/sunos5/2.1/lib/python2.1/site-packages/weave/blitz-20001213/blitz/array/storage.h", line 279: Where: While specializing "blitz::GeneralArrayStorage<1>".
"/home/skip/tmp/sunos5/2.1/lib/python2.1/site-packages/weave/blitz-20001213/blitz/array/storage.h", line 279: Where: Specialized in non-template code.
"/home/skip/tmp/sunos5/2.1/lib/python2.1/site-packages/weave/blitz-20001213/blitz/array/storage.h", line 254: Error: blitz::GeneralArrayStorage<1>::ordering_ is not accessible from blitz::FortranArray<1>.
"/home/skip/tmp/sunos5/2.1/lib/python2.1/site-packages/weave/blitz-20001213/blitz/array/storage.h", line 279: Where: While specializing "blitz::FortranArray<1>".
"/home/skip/tmp/sunos5/2.1/lib/python2.1/site-packages/weave/blitz-20001213/blitz/array/storage.h", line 279: Where: Specialized in non-template code.
"/home/skip/tmp/sunos5/2.1/lib/python2.1/site-packages/weave/blitz-20001213/blitz/array/storage.h", line 255: Error: blitz::GeneralArrayStorage<1>::ascendingFlag_ is not accessible from blitz::FortranArray<1>.
"/home/skip/tmp/sunos5/2.1/lib/python2.1/site-packages/weave/blitz-20001213/blitz/array/storage.h", line 279: Where: While specializing "blitz::FortranArray<1>".
"/home/skip/tmp/sunos5/2.1/lib/python2.1/site-packages/weave/blitz-20001213/blitz/array/storage.h", line 279: Where: Specialized in non-template code.
"/home/skip/tmp/sunos5/2.1/lib/python2.1/site-packages/weave/blitz-20001213/blitz/array/storage.h", line 256: Error: blitz::GeneralArrayStorage<1>::base_ is not accessible from blitz::FortranArray<1>.
"/home/skip/tmp/sunos5/2.1/lib/python2.1/site-packages/weave/blitz-20001213/blitz/array/storage.h", line 279: Where: While specializing "blitz::FortranArray<1>".
"/home/skip/tmp/sunos5/2.1/lib/python2.1/site-packages/weave/blitz-20001213/blitz/array/storage.h", line 279: Where: Specialized in non-template code.
"/home/skip/tmp/sunos5/2.1/lib/python2.1/site-packages/weave/blitz-20001213/blitz/tinyvec.h", line 488: Error: Unable to parse field declaration in class template: skipping field.
"/home/skip/tmp/sunos5/2.1/lib/python2.1/site-packages/weave/blitz-20001213/blitz/tinyvec.h", line 488: Error: Unable to parse field declaration in class template: skipping field.
"/home/skip/tmp/sunos5/2.1/lib/python2.1/site-packages/weave/blitz-20001213/blitz/tinyvec.h", line 488: Error: Unable to parse field declaration in class template: skipping field.
"/home/skip/tmp/sunos5/2.1/lib/python2.1/site-packages/weave/blitz-20001213/blitz/tinyvec.h", line 488: Error: Unable to parse field declaration in class template: skipping field.
"/home/skip/tmp/sunos5/2.1/lib/python2.1/site-packages/weave/blitz-20001213/blitz/tinyvec.h", line 488: Error: Unable to parse field declaration in class template: skipping field.
"/home/skip/tmp/sunos5/2.1/lib/python2.1/site-packages/weave/blitz-20001213/blitz/tinyvec.h", line 488: Error: Unable to parse field declaration in class template: skipping field.
"/home/skip/tmp/sunos5/2.1/lib/python2.1/site-packages/weave/blitz-20001213/blitz/tinyvec.h", line 488: Error: Unable to parse field declaration in class template: skipping field.
"/home/skip/tmp/sunos5/2.1/lib/python2.1/site-packages/weave/blitz-20001213/blitz/tinyvec.h", line 488: Error: Unable to parse field declaration in class template: skipping field.
"/home/skip/tmp/sunos5/2.1/lib/python2.1/site-packages/weave/blitz-20001213/blitz/tinyvec.h", line 488: Error: Unable to parse field declaration in class template: skipping field.
"/home/skip/tmp/sunos5/2.1/lib/python2.1/site-packages/weave/blitz-20001213/blitz/tinyvec.h", line 488: Error: Unable to parse field declaration in class template: skipping field.
"/home/skip/tmp/sunos5/2.1/lib/python2.1/site-packages/weave/blitz-20001213/blitz/tinyvec.h", line 488: Error: Unable to parse field declaration in class template: skipping field.
"/home/skip/tmp/sunos5/2.1/lib/python2.1/site-packages/weave/blitz-20001213/blitz/tinyvec.h", line 488: Error: Unable to parse field declaration in class template: skipping field.
"/home/skip/tmp/sunos5/2.1/lib/python2.1/site-packages/weave/blitz-20001213/blitz/tinyvec.h", line 488: Error: Unable to parse field declaration in class template: skipping field.
"/home/skip/tmp/sunos5/2.1/lib/python2.1/site-packages/weave/blitz-20001213/blitz/tinyvec.h", line 488: Error: Unable to parse field declaration in class template: skipping field.
"/home/skip/tmp/sunos5/2.1/lib/python2.1/site-packages/weave/blitz-20001213/blitz/tinyvec.h", line 488: Error: Unable to parse field declaration in class template: skipping field.
"/home/skip/tmp/sunos5/2.1/lib/python2.1/site-packages/weave/blitz-20001213/blitz/tinyvec.h", line 488: Error: Unable to parse field declaration in class template: skipping field.
"/home/skip/tmp/sunos5/2.1/lib/python2.1/site-packages/weave/blitz-20001213/blitz/array/storage.h", line 282: Where: While specializing "blitz::GeneralArrayStorage<2>".
"/home/skip/tmp/sunos5/2.1/lib/python2.1/site-packages/weave/blitz-20001213/blitz/array/storage.h", line 282: Where: Specialized in non-template code.
Compilation aborted, too many Error messages.
Ewarning: specified build_dir '_bad_path_' does not exist or is not writable. Trying default locations
...warning: specified build_dir '..' does not exist or is not writable. Trying default locations
.warning: specified build_dir '_bad_path_' does not exist or is not writable. Trying default locations
...warning: specified build_dir '..' does not exist or is not writable. Trying default locations
...Abort (core dumped)
and here's a gdb backtrace (currently without symbols - let me know if you
need me to recompile with -g):
#0 0xff259b0c in __sigprocmask () from /usr/lib/libthread.so.1
#1 0xff24e544 in _resetsig () from /usr/lib/libthread.so.1
#2 0xff24dc34 in _sigon () from /usr/lib/libthread.so.1
#3 0xff250da8 in _thrp_kill () from /usr/lib/libthread.so.1
#4 0xfef4ae68 in raise () from /usr/lib/libc.so.1
#5 0xfef35644 in abort () from /usr/lib/libc.so.1
#6 0xff1d466c in __1cH__CimplMex_terminate6F_v_ () from /usr/lib/libCrun.so.1
#7 0xff1d59ac in __1cG__CrunIex_throw6Fpvpkn0AQstatic_type_info_pF1_v_v_ ()
from /usr/lib/libCrun.so.1
#8 0xfd4d2fd0 in __1cLthrow_error6FpnH_object_pkc_v_ ()
from /home/skip/.python21_compiled/sc_d41d8cd98f00b204e9800998ecf8427e0.so
#9 0xfd4d31cc in __1cZhandle_variable_not_found6Fpc_v_ ()
from /home/skip/.python21_compiled/sc_d41d8cd98f00b204e9800998ecf8427e0.so
#10 0xfd4d3214 in __1cMget_variable6FpcpnH_object_2_2_ ()
from /home/skip/.python21_compiled/sc_d41d8cd98f00b204e9800998ecf8427e0.so
#11 0xfd4d32cc in __1cNcompiled_func6FpnH_object_1_1_ ()
from /home/skip/.python21_compiled/sc_d41d8cd98f00b204e9800998ecf8427e0.so
#12 0x23c88 in call_object ()
#13 0x23a54 in PyEval_CallObjectWithKeywords ()
#14 0x7b6a4 in builtin_apply ()
#15 0x21bfc in eval_code2 ()
#16 0x242bc in fast_function ()
#17 0x21d4c in eval_code2 ()
#18 0x242bc in fast_function ()
#19 0x21d4c in eval_code2 ()
#20 0x24184 in call_eval_code2 ()
#21 0x23c58 in call_object ()
#22 0x2400c in call_method ()
#23 0x23c28 in call_object ()
#24 0x23e90 in call_instance ()
#25 0x23ce8 in call_object ()
#26 0x24660 in do_call ()
#27 0x21d68 in eval_code2 ()
#28 0x24184 in call_eval_code2 ()
#29 0x23c58 in call_object ()
#30 0x2400c in call_method ()
#31 0x23c28 in call_object ()
#32 0x23e90 in call_instance ()
#33 0x23ce8 in call_object ()
#34 0x24660 in do_call ()
#35 0x21d68 in eval_code2 ()
#36 0x24184 in call_eval_code2 ()
#37 0x23c58 in call_object ()
#38 0x2400c in call_method ()
#39 0x23c28 in call_object ()
#40 0x23e90 in call_instance ()
#41 0x23ce8 in call_object ()
#42 0x24660 in do_call ()
#43 0x21d68 in eval_code2 ()
#44 0x24184 in call_eval_code2 ()
#45 0x23c58 in call_object ()
#46 0x2400c in call_method ()
#47 0x23c28 in call_object ()
#48 0x23e90 in call_instance ()
#49 0x23ce8 in call_object ()
#50 0x24660 in do_call ()
#51 0x21d68 in eval_code2 ()
#52 0x242bc in fast_function ()
#53 0x21d4c in eval_code2 ()
#54 0x242bc in fast_function ()
#55 0x21d4c in eval_code2 ()
#56 0x1db1c in PyEval_EvalCode ()
#57 0x3d258 in run_node ()
#58 0x3c120 in PyRun_InteractiveOneFlags ()
#59 0x3bf14 in PyRun_InteractiveLoopFlags ()
#60 0x3bde4 in PyRun_AnyFileExFlags ()
#61 0x19e08 in Py_Main ()
(I tried setting the language to c++ but it still didn't demangle the C++
names.)
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