Python developers ver. installation failed

Mateusz Koryciński mat.korycinski at gmail.com
Fri Oct 22 10:09:15 EDT 2010


Hi,

I need to install Cogent via python installation script. Unfortunately 
after typing in command line: "python setup.py build" or "python 
setup.py install" (I've tried with sudo as well) I receive something 
like that:

running install
running build
running build_py
running build_ext
building 'cogent.align._compare' extension
gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall 
-Wstrict-prototypes -fPIC 
-I/home/mateusz/Programy/Bioinfo/Cogent/include 
-I/usr/lib/python2.6/dist-packages/numpy/core/include 
-I/usr/include/python2.6 -c cogent/align/_compare.c -o 
build/temp.linux-i686-2.6/cogent/align/_compare.o -w
cogent/align/_compare.c:4:20: error: Python.h: No such file or directory
cogent/align/_compare.c:5:26: error: structmember.h: No such file or 
directory
cogent/align/_compare.c:7:6: error: #error Python headers needed to 
compile C extensions, please install development version of Python.
error: command 'gcc' failed with exit status 1


So I'm trying to install Python 3.2 - after 'make install' command at 
the end I receive:

Removing /usr/local/lib/python3.2/lib-dynload/Python-3.2a3-py3.2.egg-info
Writing /usr/local/lib/python3.2/lib-dynload/Python-3.2a3-py3.2.egg-info
Creating directory /usr/local/share/man/man1
/usr/bin/install: can't create directory `/usr/local/share/man/man1': 
File exists
make: *** [maninstall] Error 1

Of course I've tried as a root move (not copy) man directory from 
/usr/local/share/ to root /home but it have not helped at all.

Could somebody help me?

Will be very thankfully.

Best Regards,
Mateusz

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