Gnuplot.py and, _by far_, the weirdest thing I've ever seen on my computer
James Stroud
jstroud at mbi.ucla.edu
Mon Apr 4 19:27:39 EDT 2005
Are you on NFS or are you using a raid? This may have to do with the time it
takes to access your files, etc.
On Monday 04 April 2005 02:23 pm, syd wrote:
> I don't even know where to begin. This is just bizarre. I just picked
> up the Gnuplot.py module (a light interface to gnuplot commands) and
> was messing around with it today.
>
> I've got a tiny script, but it only works from the command line about
> half the time! In the python interpreter, 100%. Ipython, 100%. I'm
> not kidding.
>
> #!/bin/env python
> import Gnuplot
> g = Gnuplot.Gnuplot(debug=1)
> g.title('A simple example')
> g('set data style linespoints')
> g('set terminal png small color')
> g('set output "myGraph.png"')
> g.plot([[0,1.1], [1,5.8], [2,3.3], [3,100]])
>
> Here's just one example -- it does not work, then it works. It seems
> totally random. It will work a few times, then it won't for a few
> times...
>
> bash-2.05b$ ./myGnu.py
> gnuplot> set title "A simple example"
> gnuplot> set data style linespoints
> gnuplot> set terminal png small color
> gnuplot> set output "myGraph.png"
> gnuplot> plot '/tmp/tmp5LXAow' notitle
>
> gnuplot> plot '/tmp/tmp5LXAow' notitle
> ^
> can't read data file "/tmp/tmp5LXAow"
> line 0: util.c: No such file or directory
>
> bash-2.05b$ ./myGnu.py
> gnuplot> set title "A simple example"
> gnuplot> set data style linespoints
> gnuplot> set terminal png small color
> gnuplot> set output "myGraph.png"
> gnuplot> plot '/tmp/tmpHMTkpL' notitle
>
> (and it makes the graph image just fine)
>
> I mean what the hell is going on? My permissions on /tmp are wide open
> (drwxrwxrwt). It does the same thing when I run as root. And it
> _always_ works when I use the interpreter or interactive python.
>
> Any clues would be greatly appreciated. I'm baffled.
--
James Stroud, Ph.D.
UCLA-DOE Institute for Genomics and Proteomics
Box 951570
Los Angeles, CA 90095
http://www.jamesstroud.com/
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