[Numpy-discussion] Why do mgrid and meshgrid not return broadcast arrays?

Per.Brodtkorb at ffi.no Per.Brodtkorb at ffi.no
Thu Mar 9 03:01:06 EST 2017


The reason for returning copies from meshgrid as default instead of views into to input arrays, was to not break backwards compatibility.
The old meshgrid returned copied arrays, which is safe if you need to write to those arrays.
If you use copy=False, a view into the original arrays are returned in order to
conserve memory, but will likely return non-contiguous  arrays.  Furthermore, more than one element of a broadcast array
may refer to a single memory location.

Per A

From: NumPy-Discussion [mailto:numpy-discussion-bounces at scipy.org] On Behalf Of Juan Nunez-Iglesias
Sent: 9. mars 2017 08:34
To: Discussion of Numerical Python
Subject: Re: [Numpy-discussion] Why do mgrid and meshgrid not return broadcast arrays?

Ah, fantastic, thanks Per!

I'd still be interested to hear from the core devs as to why this isn't the default, both with meshgrid and mgrid...

Juan.

On 9 Mar 2017, 6:29 PM +1100, Per.Brodtkorb at ffi.no<mailto:Per.Brodtkorb at ffi.no>, wrote:

Hi, Juan.

Meshgrid can actually give what you want, but you must use the options: copy=False  and indexing=’ij’.

In [7]: %timeit np.meshgrid(np.arange(512), np.arange(512))
1000 loops, best of 3: 1.24 ms per loop

In [8]: %timeit np.meshgrid(np.arange(512), np.arange(512), copy=False)
10000 loops, best of 3: 27 µs per loop

In [9]: %timeit np.meshgrid(np.arange(512), np.arange(512), copy=False, indexing='ij')
10000 loops, best of 3: 23 µs per loop

Best regards
Per A. Brodtkorb

From: NumPy-Discussion [mailto:numpy-discussion-bounces at scipy.org] On Behalf Of Juan Nunez-Iglesias
Sent: 9. mars 2017 04:20
To: Discussion of Numerical Python
Subject: Re: [Numpy-discussion] Why do mgrid and meshgrid not return broadcast arrays?

Hi Warren,

ogrid doesn’t solve my problem. Note that my code returns arrays that would evaluate as equal to the mgrid output. It’s just that they are copied in mgrid into a giant array, instead of broadcast:


In [176]: a0, b0 = np.mgrid[:5, :5]

In [177]: a1, b1 = th.broadcast_mgrid((np.arange(5), np.arange(5)))

In [178]: a0
Out[178]:
array([[0, 0, 0, 0, 0],
       [1, 1, 1, 1, 1],
       [2, 2, 2, 2, 2],
       [3, 3, 3, 3, 3],
       [4, 4, 4, 4, 4]])

In [179]: a1
Out[179]:
array([[0, 0, 0, 0, 0],
       [1, 1, 1, 1, 1],
       [2, 2, 2, 2, 2],
       [3, 3, 3, 3, 3],
       [4, 4, 4, 4, 4]])

In [180]: a0.strides
Out[180]: (40, 8)

In [181]: a1.strides
Out[181]: (8, 0)



On 9 Mar 2017, 2:05 PM +1100, Warren Weckesser <warren.weckesser at gmail.com<mailto:warren.weckesser at gmail.com>>, wrote:


On Wed, Mar 8, 2017 at 9:48 PM, Juan Nunez-Iglesias <jni.soma at gmail.com<mailto:jni.soma at gmail.com>> wrote:
I was a bit surprised to discover that both meshgrid nor mgrid return fully instantiated arrays, when simple broadcasting (ie with stride=0 for other axes) is functionally identical and happens much, much faster.


Take a look at ogrid: https://docs.scipy.org/doc/numpy/reference/generated/numpy.ogrid.html
Warren
I wrote my own function to do this:


def broadcast_mgrid(arrays):
    shape = tuple(map(len, arrays))
    ndim = len(shape)
    result = []
    for i, arr in enumerate(arrays, start=1):
        reshaped = np.broadcast_to(arr[[...] + [np.newaxis] * (ndim - i)],
                                   shape)
        result.append(reshaped)
    return result


For even a modest-sized 512 x 512 grid, this version is close to 100x faster:


In [154]: %timeit th.broadcast_mgrid((np.arange(512), np.arange(512)))
10000 loops, best of 3: 25.9 µs per loop

In [156]: %timeit np.meshgrid(np.arange(512), np.arange(512))
100 loops, best of 3: 2.02 ms per loop

In [157]: %timeit np.mgrid[:512, :512]
100 loops, best of 3: 4.84 ms per loop


Is there a conscious design decision as to why this isn’t what meshgrid/mgrid do already? Or would a PR be welcome to do this?

Thanks,

Juan.

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