[Neuroimaging] dicom to nifti

[David Soto]

Hi, 

I am trying to convert single dicom files to a nifti file for a real time fMRI analysis 
the code looks like this 

___ 
from nibabel.nicom import dicomreaders 
import pydicom 
dataset = pydicom.dcmread(dcm[0]) 
pepe = dicomreaders.mosaic_to_nii(dataset) 
pepe_nii = load_img(pepe) # loading nii with nibabel 
____ 

i tried this a couple of days on our Siemens Prisma and it worked fine using a phantom 
today using the same scanner and phantom sequence it gives an error 
DicomReadError: data does not appear to be in mosaic format 

could you help please? 

cheers 
David 
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