[Neuroimaging] Scrubbing DTI images

Chris Filo Gorgolewski krzysztof.gorgolewski at gmail.com
Tue May 17 16:34:52 EDT 2016


You should look into RESTORE which fits DTI with outliers removed/down
weighted: http://nipy.org/dipy/examples_built/restore_dti.html

On Mon, May 16, 2016 at 1:08 PM, Zeydabadinezhad, Mahmoud <
mahmoud.zeydabadinezhad at emory.edu> wrote:

> Dear all,
>
> I have some DTI images collected in 61 directions + 6 B0s in 3T. I was
> wondering if you could give me a hint how can I do scrubbing on my DTI data
> either using FSL or DIPY or any other script.
> By scrubbing, I mean the same idea used in fMRI community i.e. detecting
> the outlier/motion corrupted slices or volumes and removing them from DTI
> calculation.
> I appreciate your time and help.
>
> Thank you!
> Mahmoud
>
>
> ------------------------------
>
> This e-mail message (including any attachments) is for the sole use of
> the intended recipient(s) and may contain confidential and privileged
> information. If the reader of this message is not the intended
> recipient, you are hereby notified that any dissemination, distribution
> or copying of this message (including any attachments) is strictly
> prohibited.
>
> If you have received this message in error, please contact
> the sender by reply e-mail message and destroy all copies of the
> original message (including attachments).
>
> _______________________________________________
> Neuroimaging mailing list
> Neuroimaging at python.org
> https://mail.python.org/mailman/listinfo/neuroimaging
>
>
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://mail.python.org/pipermail/neuroimaging/attachments/20160517/1fd5df19/attachment.html>


More information about the Neuroimaging mailing list